rpl21 - Plant Editosome Database - BIG Data Center

Summary

Gene: rpl21
Function: Ribosomal protein
Species: 40
Editing Types:
U-to-C (39)
C-to-U (5)
Editing Events: 52 (U-to-C: 39   NA: 8   C-to-U: 5)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Adiantum capillus-venerisChloroplast1
NA: 1
108215-108571CDS+NANA=>NANA=>NA
Alsophila spinulosaChloroplast1
NA: 1
113157-113513CDS+NANA=>NANA=>NA
Ampelopteris proliferaChloroplast1
U-to-C: 1
109109CDS+U-to-CUAA=>CAATERM=>Q
Anthoceros angustusChloroplast10
C-to-U: 5
U-to-C: 5
125924
126039
126059
126060
126062
126155
126188
126192
126203
126207
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+U-to-C
U-to-C
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
U-to-C
C-to-U
U-to-C
UGA=>CGA
UUG=>UCG
CGG=>UGG
ACU=>AUU
UGA=>CGA
CUC=>UUC
CCC=>UCC
UGA=>CGA
UCU=>UUU
CUC=>CCC
TERM=>R
L=>S
R=>W
T=>I
TERM=>R
L=>F
P=>S
TERM=>R
S=>F
L=>P
Athyrium anisopterumChloroplast1
U-to-C: 1
108840CDS+U-to-CUGA=>CGATERM=>R
Athyrium opacumChloroplast1
U-to-C: 1
108603CDS+U-to-CUGA=>UGCTERM=>C
Athyrium sheareriChloroplast1
U-to-C: 1
108710CDS+U-to-CUGA=>UGCTERM=>C
Athyrium sinenseChloroplast1
U-to-C: 1
108818CDS+U-to-CUGA=>CGATERM=>R
Austroblechnum melanocaulonChloroplast1
U-to-C: 1
108409CDS+U-to-CUGA=>UGCTERM=>C
Cyrtomium devexiscapulaeChloroplast1
U-to-C: 1
109022CDS+U-to-CUGA=>CGATERM=>R
Cyrtomium falcatumChloroplast1
U-to-C: 1
109148CDS+U-to-CUGA=>CGATERM=>R
Cystopteris chinensisChloroplast1
U-to-C: 1
108946CDS+U-to-CUGA=>UGCTERM=>C
Deparia lanceaChloroplast1
U-to-C: 1
108552CDS+U-to-CUGA=>UGCTERM=>C
Deparia pycnosoraChloroplast1
U-to-C: 1
108803CDS+U-to-CUGA=>UGCTERM=>C
Deparia viridifronsChloroplast1
U-to-C: 1
108580CDS+U-to-CUGA=>UGCTERM=>C
Diplaziopsis cavalerianaChloroplast1
U-to-C: 1
109373CDS+U-to-CUGA=>CGATERM=>R
Diplaziopsis javanicaChloroplast1
U-to-C: 1
109266CDS+U-to-CUGA=>UGCTERM=>C
Diplazium bellumChloroplast1
U-to-C: 1
108941CDS+U-to-CUGA=>UGCTERM=>C
Diplazium dilatatumChloroplast1
U-to-C: 1
108661CDS+U-to-CUGA=>CGATERM=>R
Diplazium dushanenseChloroplast1
U-to-C: 1
108252CDS+U-to-CUGA=>UGCTERM=>C
Diplazium striatumChloroplast1
U-to-C: 1
108278CDS+U-to-CUGA=>UGCTERM=>C
Diplazium unilobumChloroplast1
U-to-C: 1
108830CDS+U-to-CUGA=>UGCTERM=>C
Diplopterygium glaucumChloroplast1
NA: 1
116836-117192NA+NANA=>NANA=>NA
Dryopteris decipiensChloroplast1
U-to-C: 1
108700CDS+U-to-CUGA=>UGCTERM=>C
Homalosorus pycnocarposChloroplast1
U-to-C: 1
109599CDS+U-to-CUGA=>UGCTERM=>C
Hypodematium crenatumChloroplast1
U-to-C: 1
108041CDS+U-to-CUGA=>UGCTERM=>C
Isoetes flaccidaChloroplast1
NA: 1
119807-120163CDS-NANA=>NANA=>NA
Lepisorus clathratusChloroplast1
U-to-C: 1
110996CDS+U-to-CUGA=>UGCTERM=>C
Macrothelypteris torresianaChloroplast1
U-to-C: 1
108708CDS+U-to-CUGA=>UGCTERM=>C
Matteuccia struthiopterisChloroplast1
U-to-C: 1
108443CDS+U-to-CUAA=>UCATERM=>S
Myriopteris lindheimeriChloroplast1
U-to-C: 1
111233CDS+U-to-CUGA=>CGATERM=>R
Nothoceros aenigmaticusPlastid2
NA: 2
138554-138910NA
NA
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Onoclea sensibilisChloroplast1
U-to-C: 1
106907CDS+U-to-CUAA=>UCATERM=>S
Pseudophegopteris auritaChloroplast1
U-to-C: 1
108101CDS+U-to-CUGA=>UGCTERM=>C
Pteridium aquilinum subsp. aquilinumChloroplast1
U-to-C: 1
110503CDS+U-to-CUGA=>CGATERM=>R
Rhachidosorus consimilisChloroplast1
U-to-C: 1
109917CDS+U-to-CUGA=>UGCTERM=>C
Stegnogramma sagittifoliaChloroplast1
U-to-C: 1
108562CDS+U-to-CUGA=>UGCTERM=>C
Woodsia macrochlaenaChloroplast1
U-to-C: 1
108685CDS+U-to-CUGA=>UGCTERM=>C
Woodsia polystichoidesChloroplast1
U-to-C: 1
108395CDS+U-to-CUGA=>UGCTERM=>C
Woodwardia unigemmataChloroplast1
U-to-C: 1
110059CDS+U-to-CUGA=>CGATERM=>R
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)