| Species: | Stegnogramma sagittifolia |
| NCBI Taxonomy: | 1132989 |
| Organelle: | Chloroplast (NC_035863.1) |
| Edited Genes: | 59 |
| Editing Events: | 140 |
| Gene | Editing Events | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
|---|---|---|---|---|---|---|---|---|
| accD | 2 | 54212 54990 | CDS CDS | + + | mRNA mRNA | C-to-U U-to-C | ACG=>AUG UAA=>UAC | T=>M TERM=>Y |
| atpA | 2 | 10611 10114-11637 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpB | 1 | 50134-51615 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| atpF | 3 | 11718-12127 12842-12986 12985 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpH | 2 | 13305-13550 13549 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpI | 2 | 14990 14313-15059 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ccsA | 1 | 110396 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| chlB | 2 | 4859-6403 6154 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| chlL | 3 | 126701-127603 126880 127602 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| chlN | 1 | 125235-126629 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| infA | 3 | 75921 75867 75745-75987 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| matK | 3 | 1456-2961 2697 2703 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ndhA | 2 | 115770-116327 117288-117845 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhB | 2 | 149979-150749 506-1243 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhC | 2 | 48062-48424 48064 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhD | 1 | 111737-113245 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhE | 2 | 113954-114256 114255 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhF | 4 | 105740-107977 107976 107617 107341 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| ndhG | 2 | 114348-114944 114943 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhH | 2 | 117849 117847-119025 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhI | 1 | 115073-115627 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhK | 2 | 47334-48071 47363 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Novel | 1 | 1242 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| petA | 2 | 58745 58755 | CDS CDS | + + | mRNA mRNA | U-to-C U-to-C | UAG=>UCG UAA=>UAC | TERM=>S TERM=>Y |
| petB | 1 | 72339 | CDS | + | mRNA | C-to-U | CAA=>UAA | Q=>TERM |
| petD | 2 | 73199-73670 72542-72546 | CDS CDS | + + | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| petN | 2 | 29243-29332 29331 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaB | 2 | 38861 36658-38862 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaC | 1 | 113383-113628 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbB | 2 | 68286 69809 | CDS CDS | + + | mRNA mRNA | C-to-U C-to-U | ACG=>AUG CAA=>UAA | T=>M Q=>TERM |
| psbC | 1 | 31620-33041 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbD | 1 | 33040 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| psbE | 2 | 60783-61034 60983 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbF | 1 | 60654-60773 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbH | 1 | 70528 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbL | 2 | 60516-60632 60631 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbM | 1 | 28266 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rpl14 | 3 | 76730 77095 76728-77096 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | C-to-U C-to-U NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl16 | 3 | 78395 77221-77625 78388-78396 | NA CDS CDS | + - - | Unanotated Transcript mRNA mRNA | C-to-U NA NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl2 | 3 | 81146-81542 79980-80416 80357 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl21 | 1 | 108562 | CDS | + | mRNA | U-to-C | UGA=>UGC | TERM=>C |
| rpl22 | 3 | 79272-79649 79403 79648 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl23 | 2 | 81882 81614-81883 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl36 | 3 | 75501 75611 75499-75612 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | C-to-U C-to-U NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpoA | 2 | 74760 73978-75000 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoB | 7 | 23367-26582 25865 24851 26354 24002 26456 24899 | CDS NA NA NA NA NA NA | - + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC1 | 4 | 23202 21360 22885-23316 20518-22182 | NA NA CDS CDS | + + - - | Unanotated Transcript Unanotated Transcript mRNA mRNA | U-to-C U-to-C NA NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC2 | 2 | 20152 16097-20383 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps11 | 2 | 75037-75429 75309 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps16 | 3 | 3623-3853 4658-4699 3643 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rps18 | 1 | 63743 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rps19 | 2 | 79944 79667-79945 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps2 | 4 | 15573 15537 15450 15259-15966 | NA NA NA CDS | + + + - | Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rps3 | 3 | 78508-79164 79163 79119 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rps4 | 3 | 44183-44803 44802 44602 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rps7 | 2 | 137702 95629 | NA CDS | + + | Unanotated Transcript mRNA | U-to-C U-to-C | NA=>NA UAA=>UAC | NA=>NA TERM=>Y |
| ycf1 | 3 | 119698-124767 123804 124766 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ycf2 | 12 | 133667 128804 130493 133454 131390 134813 98518 99664 101941 102838 104527 99877 | NA NA NA NA NA NA CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + + | Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA mRNA mRNA mRNA mRNA mRNA | U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA UGA=>UGC UAA=>UAC UAA=>UAC UAA=>UAC UAA=>UAC UAA=>UAC | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA TERM=>C TERM=>Y TERM=>Y TERM=>Y TERM=>Y TERM=>Y |
| ycf3 | 5 | 42272-42500 41479-41640 43242-43366 42460 43365 | CDS CDS CDS NA NA | - - - + + | mRNA mRNA mRNA Unanotated Transcript Unanotated Transcript | NA NA NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
( NA = Data Not Available )