Plant
Editosome
Database
Summary
| Species: | Athyrium sinense |
| NCBI Taxonomy: | 672195 |
| Organelle: | Chloroplast (NC_035839.1) |
| Edited Genes: | 63 |
| Editing Sites: | 146 |
| Gene | Editing Sites | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
|---|---|---|---|---|---|---|---|---|
| accD | 1 | 54391 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| atpA | 3 | 10116-11639 10613 11537 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpB | 2 | 50308-51789 51788 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpF | 3 | 11720-12129 12834-12978 12977 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpH | 2 | 13326-13571 13570 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpI | 3 | 14312-15058 14989 15057 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ccsA | 1 | 110660 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| chlB | 2 | 4827-6371 6122 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| chlL | 3 | 126883-127785 127062 127784 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| chlN | 2 | 125430-126815 126814 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| infA | 3 | 75881-76123 76003 76057 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| matK | 4 | 1456-2958 2694 2700 2957 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| ndhA | 2 | 116010-116567 117530-118087 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhB | 2 | 150180-150950 509-1246 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhC | 2 | 47951-48313 47953 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhD | 1 | 112002-113510 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhE | 1 | 114211-114513 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhF | 4 | 105999-108236 107600 107876 108235 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| ndhG | 2 | 114605-115198 115197 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhH | 1 | 118089-119267 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhI | 1 | 115335-115865 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhK | 1 | 47223-47960 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| Novel | 1 | 1245 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| petA | 2 | 58906 58914 | CDS CDS | + + | mRNA mRNA | U-to-C U-to-C | UAG=>UCG UAA=>CAA | TERM=>S TERM=>Q |
| petB | 1 | 72468 | CDS | + | mRNA | C-to-U | CGA=>UGA | R=>TERM |
| petD | 2 | 72670-72677 73316-73787 | CDS CDS | + + | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| petN | 2 | 29159-29251 29250 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaB | 2 | 36636-38840 38839 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaC | 1 | 113648-113893 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbB | 2 | 68408 69931 | CDS CDS | + + | mRNA mRNA | C-to-U C-to-U | ACG=>AUG CGA=>UGA | T=>M R=>TERM |
| psbC | 1 | 31543-32964 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbD | 1 | 32963 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| psbE | 2 | 60939-61190 61139 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbF | 1 | 60810-60929 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbH | 1 | 70670 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbI | 1 | 7713 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbM | 1 | 28188 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rpl14 | 3 | 76872-77240 76874 77239 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl16 | 3 | 77488-77892 78650-78658 78657 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl2 | 4 | 80242-80678 80619 81403-81799 81790 | CDS NA CDS NA | - + - + | mRNA Unanotated Transcript mRNA Unanotated Transcript | NA U-to-C NA U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rpl21 | 1 | 108818 | CDS | + | mRNA | U-to-C | UGA=>CGA | TERM=>R |
| rpl22 | 3 | 79534-79911 79665 79910 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl23 | 2 | 81868-82140 82139 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl36 | 2 | 75623-75736 75735 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoA | 2 | 74102-75124 74884 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoB | 7 | 23347-26562 23982 24831 24879 25845 26334 26436 | CDS NA NA NA NA NA NA | - + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC1 | 4 | 20499-22163 21335 22865-23296 23295 | CDS NA CDS NA | - + - + | mRNA Unanotated Transcript mRNA Unanotated Transcript | NA U-to-C NA C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC2 | 2 | 16094-20374 20143 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps11 | 2 | 75161-75553 75433 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps12 | 1 | 65813 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| rps14 | 2 | 36109-36411 36410 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps15 | 2 | 119372-119641 119640 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps16 | 4 | 3598-3828 3618 4631-4672 4671 | CDS NA CDS NA | - + - + | mRNA Unanotated Transcript mRNA Unanotated Transcript | NA U-to-C NA C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rps18 | 1 | 63912 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rps19 | 1 | 79929-80207 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| rps2 | 4 | 15245-15961 15445 15532 15568 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rps3 | 3 | 78770-79426 79381 79425 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rps4 | 2 | 44122-44742 44741 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps7 | 2 | 137855 95915 | NA CDS | + + | Unanotated Transcript mRNA | U-to-C U-to-C | NA=>NA UAA=>CAA | NA=>NA TERM=>Q |
| rps8 | 2 | 76260-76658 76657 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ycf1 | 3 | 119945-125053 124090 125052 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ycf2 | 12 | 100135 102214 103111 104800 128970 130659 131556 133635 133848 134997 98775 99922 | CDS CDS CDS CDS NA NA NA NA NA NA CDS CDS | + + + + + + + + + + + + | mRNA mRNA mRNA mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA mRNA | U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | UAA=>CAA UAA=>CAA UAA=>CAA UAA=>CAA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA UGA=>UGC UAA=>CAA | TERM=>Q TERM=>Q TERM=>Q TERM=>Q NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA TERM=>C TERM=>Q |
| ycf3 | 5 | 41452-41613 42239-42467 42427 43197-43321 43320 | CDS CDS NA CDS NA | - - + - + | mRNA mRNA Unanotated Transcript mRNA Unanotated Transcript | NA NA U-to-C NA C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
( NA = Data Not Available )
Last update: Sep 2026
(version 2.0)