| Species: | Rhachidosorus consimilis |
| NCBI Taxonomy: | 208758 |
| Organelle: | Chloroplast (NC_035862.1) |
| Edited Genes: | 60 |
| Editing Events: | 140 |
| Gene | Editing Events | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
|---|---|---|---|---|---|---|---|---|
| accD | 2 | 55987 55210 | CDS CDS | + + | mRNA mRNA | U-to-C C-to-U | UAA=>UCA ACG=>AUG | TERM=>S T=>M |
| atpA | 3 | 11595 10671 10174-11697 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpB | 2 | 51130-52611 52610 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpF | 2 | 11778-12187 12883-13027 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpH | 2 | 13389-13634 13633 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpI | 3 | 15083 15151 14406-15152 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C C-to-U NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ccsA | 1 | 111753 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| chlB | 3 | 4833-6377 6128 5996 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| chlL | 3 | 127942-128844 128843 128121 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| chlN | 1 | 126486-127874 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| infA | 3 | 76900 76846 76718-76966 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| matK | 2 | 1447-2934 2676 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhA | 2 | 117103-117660 118598-119155 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhB | 2 | 151494-152264 501-1226 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhC | 2 | 48658-49020 48660 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhD | 1 | 113091-114599 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhE | 1 | 115285-115587 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhF | 4 | 107091-109322 108686 109321 108962 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| ndhG | 2 | 115679-116272 116271 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhH | 2 | 120334 119157-120335 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhI | 1 | 116428-116958 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhK | 1 | 47930-48667 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| Novel | 1 | 1225 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| petA | 2 | 59741 59732 | CDS CDS | + + | mRNA mRNA | U-to-C U-to-C | UAA=>UCA UAG=>UCG | TERM=>S TERM=>S |
| petB | 1 | 73313 | CDS | + | mRNA | C-to-U | CGA=>UGA | R=>TERM |
| petD | 2 | 73515-73522 74159-74630 | CDS CDS | + + | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| petN | 2 | 29733-29822 29821 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaB | 2 | 39432 37229-39433 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaC | 1 | 114737-114982 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbB | 2 | 70779 69256 | CDS CDS | + + | mRNA mRNA | C-to-U C-to-U | CGA=>UGA ACG=>AUG | R=>TERM T=>M |
| psbC | 1 | 32136-33557 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbD | 1 | 33556 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| psbE | 2 | 61771-62022 61971 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbF | 1 | 61642-61761 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbL | 2 | 61504-61620 61619 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbM | 1 | 28369 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rpl14 | 3 | 78077 77712 77710-78078 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | C-to-U C-to-U NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl16 | 3 | 79492 79485-79493 78318-78722 | NA CDS CDS | + - - | Unanotated Transcript mRNA mRNA | C-to-U NA NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl2 | 3 | 82619 81082 81457 | CDS CDS CDS | + + + | mRNA mRNA mRNA | U-to-C C-to-U U-to-C | ACA=>CCA UCG=>UCU UUA=>UUC | T=>P S=>S L=>F |
| rpl21 | 1 | 109917 | CDS | + | mRNA | U-to-C | UGA=>UGC | TERM=>C |
| rpl22 | 2 | 80379-80750 80504 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl23 | 2 | 82985 82717-82986 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl36 | 2 | 76583 76471-76584 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoA | 2 | 75731 74955-75971 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoB | 7 | 23425-26640 26412 25923 26514 24957 24060 24210 | CDS NA NA NA NA NA NA | - + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC1 | 4 | 21402 23259 22942-23373 20566-22230 | NA NA CDS CDS | + + - - | Unanotated Transcript Unanotated Transcript mRNA mRNA | U-to-C U-to-C NA NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC2 | 3 | 20213 16187 16167-20444 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rps11 | 2 | 76009-76401 76281 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps15 | 2 | 120708 120440-120709 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps16 | 4 | 4617-4658 3569-3799 4657 3589 | CDS CDS NA NA | - - + + | mRNA mRNA Unanotated Transcript Unanotated Transcript | NA NA C-to-U U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rps18 | 1 | 64706 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rps19 | 1 | 80768-81046 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| rps2 | 4 | 15541 15664 15628 15341-16057 | NA NA NA CDS | + + + - | Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rps3 | 2 | 79605-80261 80260 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps4 | 2 | 44752-45372 45371 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps7 | 2 | 138936 96986 | NA CDS | + + | Unanotated Transcript mRNA | U-to-C U-to-C | NA=>NA UAA=>UCA | NA=>NA TERM=>S |
| rps8 | 2 | 77094-77492 77491 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ycf1 | 3 | 121011-126086 125123 126085 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ycf2 | 12 | 130056 136059 132642 134913 131745 134700 104177 99864 105866 101009 103280 101222 | NA NA NA NA NA NA CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + + | Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA mRNA mRNA mRNA mRNA mRNA | U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA UAA=>UCA UGA=>UGC UAA=>UCA UAA=>UCA UAA=>UCA UAA=>UCA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA TERM=>S TERM=>C TERM=>S TERM=>S TERM=>S TERM=>S |
| ycf3 | 5 | 42835-43063 43810-43934 42048-42209 43023 43933 | CDS CDS CDS NA NA | - - - + + | mRNA mRNA mRNA Unanotated Transcript Unanotated Transcript | NA NA NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
( NA = Data Not Available )