Plant
Editosome
Database
Summary
| Species: | Pteridium aquilinum subsp. aquilinum |
| NCBI Taxonomy: | 104588 |
| Organelle: | Chloroplast (NC_014348.1) |
| Edited Genes: | 46 |
| Editing Sites: | 120 |
| Gene | Editing Sites | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
|---|---|---|---|---|---|---|---|---|
| accD | 3 | 56207 56983 57136 | CDS CDS CDS | + + + | mRNA mRNA mRNA | C-to-U U-to-C C-to-U | ACG=>AUG UAA=>CAA CGA=>UGA | T=>M TERM=>Q R=>TERM |
| atpA | 3 | 10232-11755 10729 11653 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpB | 2 | 52151-53632 53631 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpF | 3 | 11843-12252 12961-13105 13104 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpH | 2 | 13433-13705 13704 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpI | 3 | 14418-15164 15095 15163 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ccsA | 1 | 112125 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| chlB | 3 | 4859-6403 6022 6154 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| chlL | 3 | 128131-129012 128289 129011 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| infA | 3 | 77591-77833 77713 77767 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| matK | 4 | 1441-2934 2670 2676 2933 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| ndhC | 2 | 47936-48298 47938 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhF | 3 | 107700-109901 109271 109547 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| petA | 2 | 60689 60698 | CDS CDS | + + | mRNA mRNA | U-to-C U-to-C | UAG=>CAG UAA=>CAA | TERM=>Q TERM=>Q |
| petB | 1 | 72756 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| petN | 2 | 29623-29712 29711 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaA | 2 | 38797-41049 41048 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaB | 2 | 36567-38771 38770 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbB | 1 | 70212 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbC | 1 | 31736-33157 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbD | 3 | 33105-34166 33156 34165 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| psbE | 2 | 62885-63136 63085 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbL | 2 | 62618-62734 62733 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbM | 1 | 28153 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rpl16 | 3 | 79399-79803 80562-80570 80569 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl2 | 4 | 82141-82577 82518 83324-83720 83711 | CDS NA CDS NA | - + - + | mRNA Unanotated Transcript mRNA Unanotated Transcript | NA U-to-C NA U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rpl20 | 2 | 66184-66540 66539 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl21 | 1 | 110503 | CDS | + | mRNA | U-to-C | UGA=>CGA | TERM=>R |
| rpl22 | 2 | 81388-81807 81561 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl23 | 2 | 83779-84054 84053 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl36 | 2 | 77349-77462 77461 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoA | 2 | 75800-76843 76603 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoB | 9 | 23384-26599 24019 24169 24868 24916 25612 25882 26371 26473 | CDS NA NA NA NA NA NA NA NA | - + + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC1 | 3 | 20574-22219 22901-23333 23219 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpoC2 | 2 | 16198-20466 20235 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps11 | 2 | 76883-77275 77155 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps15 | 2 | 120694-120963 120962 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps18 | 1 | 65717 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rps2 | 4 | 15351-16067 15551 15638 15674 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rps3 | 2 | 80679-81335 81290 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps4 | 2 | 44084-44671 44503 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps7 | 2 | 139124 97574 | NA CDS | + + | Unanotated Transcript mRNA | U-to-C U-to-C | NA=>NA UAA=>CAA | NA=>NA TERM=>Q |
| rps8 | 2 | 77962-78360 78359 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ycf1 | 3 | 121260-126323 125360 126322 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ycf2 | 10 | 100394 101765 103943 104840 106526 130172 131858 132755 134933 136304 | CDS CDS CDS CDS CDS NA NA NA NA NA | + + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | UGA=>CGA UAA=>CAA UAA=>CAA UAA=>CAA UAA=>CAA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | TERM=>R TERM=>Q TERM=>Q TERM=>Q TERM=>Q NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| ycf3 | 4 | 41350-41559 42172-42400 42360 43141-43265 | CDS CDS NA CDS | - - + - | mRNA mRNA Unanotated Transcript mRNA | NA NA U-to-C NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
( NA = Data Not Available )
Last update: Sep 2026
(version 2.0)