| Species: | Macrothelypteris torresiana |
| NCBI Taxonomy: | 173909 |
| Organelle: | Chloroplast (NC_035858.1) |
| Edited Genes: | 61 |
| Editing Events: | 142 |
| Gene | Editing Events | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
|---|---|---|---|---|---|---|---|---|
| accD | 2 | 55191 54413 | CDS CDS | + + | mRNA mRNA | U-to-C C-to-U | UAA=>UAC ACG=>AUG | TERM=>Y T=>M |
| atpA | 3 | 11576 10652 10155-11678 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpB | 1 | 50332-51813 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| atpF | 3 | 12888-13032 11773-12182 13031 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpH | 2 | 13379-13624 13623 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpI | 3 | 15073 15141 14396-15142 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C C-to-U NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ccsA | 1 | 110588 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| chlB | 2 | 4865-6409 6160 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| chlL | 2 | 126803-127705 127704 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| chlN | 2 | 126740 125356-126741 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| infA | 3 | 76128 76074 75952-76194 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| matK | 3 | 1446-2951 2687 2693 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ndhA | 2 | 117433-117990 115930-116487 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhB | 2 | 149983-150753 496-1233 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhC | 2 | 48014-48376 48016 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhD | 1 | 111911-113419 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhE | 1 | 114122-114424 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhF | 4 | 105853-108105 107745 107469 108104 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| ndhG | 2 | 114522-115115 115114 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhH | 2 | 117994 117992-119170 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhI | 1 | 115250-115780 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhK | 2 | 47286-48023 47327 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Novel | 1 | 1232 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| petA | 2 | 58952 58942 | CDS CDS | + + | mRNA mRNA | U-to-C U-to-C | UAA=>UAC UAG=>UCG | TERM=>Y TERM=>S |
| petB | 1 | 72548 | CDS | + | mRNA | C-to-U | CAA=>UAA | Q=>TERM |
| petD | 2 | 72751-72755 73411-73882 | CDS CDS | + + | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| petN | 1 | 29292-29381 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psaB | 2 | 38846 36643-38847 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaC | 1 | 113557-113802 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbB | 2 | 68498 70021 | CDS CDS | + + | mRNA mRNA | C-to-U C-to-U | ACG=>AUG CAA=>UAA | T=>M Q=>TERM |
| psbC | 1 | 31633-33054 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbD | 1 | 33053 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| psbE | 2 | 61008-61259 61208 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbF | 1 | 60879-60998 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbH | 1 | 70758 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbL | 2 | 60741-60857 60856 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbM | 1 | 28303 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rpl14 | 2 | 76944 76942-77310 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl16 | 3 | 78602 77421-77825 78595-78603 | NA CDS CDS | + - - | Unanotated Transcript mRNA mRNA | C-to-U NA NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl2 | 3 | 81362-81758 80196-80632 80573 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl21 | 1 | 108708 | CDS | + | mRNA | U-to-C | UGA=>UGC | TERM=>C |
| rpl22 | 2 | 79486-79863 79617 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl23 | 2 | 82100 81829-82101 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl36 | 2 | 75822 75674-75823 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoA | 2 | 74969 74187-75209 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoB | 7 | 23436-26657 24968 26531 24920 25940 24071 26429 | CDS NA NA NA NA NA NA | - + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC1 | 4 | 21410 23270 20568-22238 22953-23384 | NA NA CDS CDS | + + - - | Unanotated Transcript Unanotated Transcript mRNA mRNA | U-to-C U-to-C NA NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC2 | 3 | 16683 20223 16177-20454 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rps11 | 2 | 75248-75640 75520 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps16 | 4 | 4669-4710 3628-3864 4709 3654 | CDS CDS NA NA | - - + + | mRNA mRNA Unanotated Transcript Unanotated Transcript | NA NA C-to-U U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rps18 | 1 | 63915 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rps19 | 2 | 80158 79881-80159 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps2 | 4 | 15620 15533 15656 15333-16049 | NA NA NA CDS | + + + - | Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rps3 | 3 | 78715-79371 79370 79326 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rps4 | 3 | 44142-44762 44561 44761 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rps7 | 2 | 137743 95803 | NA CDS | + + | Unanotated Transcript mRNA | U-to-C U-to-C | NA=>NA UAA=>UAC | NA=>NA TERM=>Y |
| rps8 | 2 | 76338-76736 76735 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ycf1 | 3 | 119859-124958 124957 123995 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ycf2 | 12 | 131468 130571 133727 128882 134873 133514 102078 104664 98673 102975 100032 99819 | NA NA NA NA NA NA CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + + | Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA mRNA mRNA mRNA mRNA mRNA | U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA UAA=>UAC UAA=>UAC UGA=>UGC UAA=>UAC UAA=>UAC UAA=>UAC | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA TERM=>Y TERM=>Y TERM=>C TERM=>Y TERM=>Y TERM=>Y |
| ycf3 | 5 | 43230-43354 41464-41625 42255-42483 42443 43353 | CDS CDS CDS NA NA | - - - + + | mRNA mRNA mRNA Unanotated Transcript Unanotated Transcript | NA NA NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| ycf4 | 1 | 56765 | CDS | + | mRNA | C-to-U | CAA=>UAA | Q=>TERM |
( NA = Data Not Available )