Plant
Editosome
Database
Summary
| Species: | Onoclea sensibilis |
| NCBI Taxonomy: | 3281 |
| Organelle: | Chloroplast (NC_035860.1) |
| Edited Genes: | 61 |
| Editing Sites: | 137 |
| Gene | Editing Sites | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
|---|---|---|---|---|---|---|---|---|
| accD | 2 | 53462 54239 | CDS CDS | + + | mRNA mRNA | C-to-U U-to-C | ACG=>AUG UAA=>UCA | T=>M TERM=>S |
| atpA | 3 | 10096-11619 10593 11517 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpB | 2 | 49366-50847 50846 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpF | 3 | 11700-12109 12822-12966 12965 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpH | 2 | 13320-13565 13564 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpI | 3 | 14328-15074 15005 15073 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| chlB | 2 | 4768-6312 6063 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| chlL | 3 | 124995-125897 125174 125896 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| chlN | 1 | 123535-124926 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| infA | 3 | 74975-75217 75097 75151 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| matK | 3 | 1417-2916 2655 2661 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ndhA | 2 | 114132-114689 115632-116189 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhB | 2 | 147240-148010 470-1207 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhC | 2 | 48001-48363 48003 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhD | 1 | 110113-111621 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhE | 1 | 112335-112637 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhF | 4 | 104084-106324 105688 105964 106323 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| ndhG | 2 | 112734-113327 113326 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhH | 1 | 116191-117369 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhI | 1 | 113456-113989 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhK | 1 | 47273-48010 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| Novel | 1 | 1206 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| petA | 2 | 57979 57988 | CDS CDS | + + | mRNA mRNA | U-to-C U-to-C | UAG=>UCG UAA=>UCA | TERM=>S TERM=>S |
| petB | 1 | 71562 | CDS | + | mRNA | C-to-U | CGA=>UGA | R=>TERM |
| petD | 2 | 71774-71781 72420-72891 | CDS CDS | + + | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| petN | 2 | 29215-29304 29303 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaB | 2 | 36645-38849 38848 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaC | 1 | 111759-112004 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbB | 2 | 67508 69031 | CDS CDS | + + | mRNA mRNA | C-to-U C-to-U | ACG=>AUG CAA=>UAA | T=>M Q=>TERM |
| psbC | 1 | 31605-33026 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbD | 1 | 33025 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| psbE | 2 | 60069-60320 60269 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbF | 1 | 59940-60059 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbH | 1 | 69747 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbI | 1 | 7663 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbL | 2 | 59802-59918 59917 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbM | 1 | 28245 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rpl14 | 3 | 75965-76333 75967 76332 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl16 | 3 | 76618-77022 77794-77802 77801 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl2 | 4 | 79376-79812 79753 80536-80932 80923 | CDS NA CDS NA | - + - + | mRNA Unanotated Transcript mRNA Unanotated Transcript | NA U-to-C NA U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rpl21 | 1 | 106907 | CDS | + | mRNA | U-to-C | UAA=>UCA | TERM=>S |
| rpl23 | 2 | 81002-81274 81273 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl36 | 2 | 74731-74844 74843 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoA | 2 | 73206-74225 73985 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoB | 8 | 23373-26588 24008 24158 24857 24905 25871 26360 26462 | CDS NA NA NA NA NA NA NA | - + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC1 | 4 | 20521-22185 21357 22891-23322 23208 | CDS NA CDS NA | - + - + | mRNA Unanotated Transcript mRNA Unanotated Transcript | NA U-to-C NA U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC2 | 2 | 16130-20404 20173 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps11 | 2 | 74262-74654 74534 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps14 | 2 | 36124-36426 36425 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps15 | 2 | 117498-117767 117766 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps16 | 3 | 3533-3763 3553 4572-4613 | CDS NA CDS | - + - | mRNA Unanotated Transcript mRNA | NA U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rps18 | 1 | 63037 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rps19 | 2 | 79063-79341 79340 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps2 | 4 | 15265-15981 15465 15552 15588 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rps3 | 2 | 77918-78574 78573 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps4 | 2 | 44156-44776 44775 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps7 | 2 | 135935 94033 | NA CDS | + + | Unanotated Transcript mRNA | U-to-C U-to-C | NA=>NA UAA=>UCA | NA=>NA TERM=>S |
| rps8 | 2 | 75355-75753 75752 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ycf1 | 3 | 118071-123170 122207 123169 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ycf2 | 8 | 100290 101187 128781 129678 131721 133080 96889 98247 | CDS CDS NA NA NA NA CDS CDS | + + + + + + + + | mRNA mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA mRNA | U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | UAA=>UCA UAA=>UCA NA=>NA NA=>NA NA=>NA NA=>NA UGA=>UGC UAA=>UCA | TERM=>S TERM=>S NA=>NA NA=>NA NA=>NA NA=>NA TERM=>C TERM=>S |
| ycf3 | 4 | 41469-41630 42256-42484 42444 43226-43350 | CDS CDS NA CDS | - - + - | mRNA mRNA Unanotated Transcript mRNA | NA NA U-to-C NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
( NA = Data Not Available )
Last update: Sep 2026
(version 2.0)