| Species: | Athyrium opacum |
| NCBI Taxonomy: | 872479 |
| Organelle: | Chloroplast (NC_035841.1) |
| Edited Genes: | 62 |
| Editing Events: | 139 |
| Gene | Editing Events | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
|---|---|---|---|---|---|---|---|---|
| accD | 1 | 54278 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| atpA | 3 | 11537 10613 10116-11639 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpB | 2 | 50202-51683 51682 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpF | 3 | 11720-12129 12863-13007 13006 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpH | 2 | 13349-13594 13593 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpI | 3 | 15012 15080 14335-15081 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C C-to-U NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ccsA | 1 | 110456 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| chlB | 2 | 4816-6360 6111 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| chlL | 3 | 126656-127558 127557 126835 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| chlN | 2 | 126587 125203-126588 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| infA | 3 | 75895 75949 75773-76015 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| matK | 3 | 1457-2962 2704 2698 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ndhA | 2 | 117309-117866 115786-116343 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhB | 2 | 149840-150610 513-1250 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhC | 2 | 47849-48211 47851 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhD | 1 | 111780-113288 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhE | 1 | 113988-114290 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhF | 4 | 105779-108016 107656 108015 107380 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| ndhG | 2 | 114382-114975 114974 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhH | 1 | 117868-119046 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhI | 1 | 115111-115641 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhK | 1 | 47121-47858 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| Novel | 1 | 1249 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| petA | 2 | 58838 58847 | CDS CDS | + + | mRNA mRNA | U-to-C U-to-C | UAG=>UCG UAA=>UCA | TERM=>S TERM=>S |
| petB | 1 | 72375 | CDS | + | mRNA | C-to-U | CGA=>UGA | R=>TERM |
| petD | 2 | 72583-72587 73233-73704 | CDS CDS | + + | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| petN | 2 | 29148-29237 29236 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaB | 2 | 38677 36474-38678 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaC | 1 | 113426-113671 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbB | 2 | 69852 68329 | CDS CDS | + + | mRNA mRNA | C-to-U C-to-U | CGA=>UGA ACG=>AUG | R=>TERM T=>M |
| psbC | 1 | 31502-32923 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbE | 2 | 60885-61136 61085 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbF | 1 | 60756-60875 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbH | 1 | 70578 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbI | 1 | 7706 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbM | 1 | 28181 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbT | 1 | 70097 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rpl14 | 3 | 76761 77126 76759-77127 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | C-to-U C-to-U NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl16 | 3 | 78549 77380-77784 78542-78550 | NA CDS CDS | + - - | Unanotated Transcript mRNA mRNA | C-to-U NA NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl2 | 4 | 80134-80570 81295-81691 81682 80511 | CDS CDS NA NA | - - + + | mRNA mRNA Unanotated Transcript Unanotated Transcript | NA NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rpl21 | 1 | 108603 | CDS | + | mRNA | U-to-C | UGA=>UGC | TERM=>C |
| rpl22 | 3 | 79426-79803 79802 79557 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl23 | 2 | 82031 81760-82032 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl36 | 2 | 75643 75531-75644 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoA | 2 | 74792 74010-75032 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoB | 7 | 23347-26562 26436 25845 24879 26334 24831 23982 | CDS NA NA NA NA NA NA | - + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC1 | 3 | 21348 22865-23296 20512-22176 | NA CDS CDS | + - - | Unanotated Transcript mRNA mRNA | U-to-C NA NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpoC2 | 2 | 20166 16117-20397 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps11 | 2 | 75069-75461 75341 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps15 | 2 | 119419 119151-119420 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps16 | 4 | 4615-4656 3597-3827 4655 3617 | CDS CDS NA NA | - - + + | mRNA mRNA Unanotated Transcript Unanotated Transcript | NA NA C-to-U U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rps18 | 1 | 63821 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rps19 | 1 | 79821-80099 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| rps2 | 4 | 15560 15596 15473 15273-15989 | NA NA NA CDS | + + + - | Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rps3 | 3 | 78662-79318 79273 79317 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rps4 | 2 | 43980-44600 44599 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps7 | 2 | 137608 95716 | NA CDS | + + | Unanotated Transcript mRNA | U-to-C U-to-C | NA=>NA UAA=>UCA | NA=>NA TERM=>S |
| rps8 | 2 | 76152-76550 76549 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ycf1 | 2 | 119720-124858 123865 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ycf2 | 10 | 128742 133602 131331 134754 130434 98571 104582 99722 102890 101993 | NA NA NA NA NA CDS CDS CDS CDS CDS | + + + + + + + + + + | Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA mRNA mRNA mRNA mRNA | U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA UGA=>UGC UAA=>UCA UAA=>UCA UAA=>UCA UAA=>UCA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA TERM=>C TERM=>S TERM=>S TERM=>S TERM=>S |
| ycf3 | 5 | 42102-42330 41314-41475 43060-43184 43183 42290 | CDS CDS CDS NA NA | - - - + + | mRNA mRNA mRNA Unanotated Transcript Unanotated Transcript | NA NA NA C-to-U U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| ycf4 | 1 | 56648 | CDS | + | mRNA | C-to-U | CAA=>UAA | Q=>TERM |
( NA = Data Not Available )