Plant
Editosome
Database
Summary
| Species: | Austroblechnum melanocaulon |
| NCBI Taxonomy: | 1329983 |
| Organelle: | Chloroplast (NC_035840.1) |
| Edited Genes: | 64 |
| Editing Sites: | 137 |
| Gene | Editing Sites | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
|---|---|---|---|---|---|---|---|---|
| accD | 1 | 54454 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| atpA | 2 | 10119-11642 11540 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpB | 2 | 50337-51818 51817 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpF | 2 | 11724-12133 12844-12988 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpH | 2 | 13340-13585 13584 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpI | 3 | 14329-15075 15006 15074 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| chlB | 3 | 4786-6330 5949 6081 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| chlL | 3 | 126304-127206 126483 127205 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| chlN | 1 | 124854-126236 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| infA | 3 | 76003-76245 76125 76244 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| matK | 2 | 1444-2946 2688 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhA | 3 | 115412-115969 116937-117509 116939 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ndhC | 2 | 48098-48460 48100 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhD | 1 | 111384-112892 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhE | 2 | 113590-113892 113891 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhF | 3 | 105602-107824 107464 107823 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ndhG | 2 | 113987-114580 114579 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhH | 1 | 117511-118689 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhI | 1 | 114739-115269 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhK | 2 | 47370-48107 47399 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| petA | 3 | 58991 59000 59683 | CDS CDS CDS | + + + | mRNA mRNA mRNA | U-to-C U-to-C C-to-U | UAG=>UCG UAA=>UCA CGA=>UGA | TERM=>S TERM=>S R=>TERM |
| petB | 1 | 72622 | CDS | + | mRNA | C-to-U | CGA=>UGA | R=>TERM |
| petD | 2 | 72821-72828 73464-73935 | CDS CDS | + + | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| petG | 1 | 62488 | CDS | + | mRNA | C-to-U | CAG=>UAG | Q=>TERM |
| petN | 2 | 29196-29300 29299 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaA | 2 | 38994-41246 38996 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaB | 2 | 36764-38968 38967 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaC | 1 | 113029-113274 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbB | 1 | 68599 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbC | 1 | 31696-33117 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbD | 1 | 33116 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| psbE | 2 | 61073-61324 61273 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbF | 1 | 60944-61063 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbH | 1 | 70833 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbL | 2 | 60806-60922 60921 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbM | 1 | 28239 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbT | 1 | 70357 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| pseudo-ndhB | 1 | 83710 | NA | + | mRNA | C-to-U | NA=>NA | NA=>NA |
| rpl14 | 3 | 76987-77355 76989 77354 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl16 | 3 | 77619-78023 78780-78788 78787 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl2 | 4 | 80372-80808 80749 81529-81925 81916 | CDS NA CDS NA | - + - + | mRNA Unanotated Transcript mRNA Unanotated Transcript | NA U-to-C NA U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rpl20 | 2 | 64540-64896 64542 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl21 | 1 | 108409 | CDS | + | mRNA | U-to-C | UGA=>UGC | TERM=>C |
| rpl22 | 2 | 79664-80041 79795 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl23 | 2 | 81992-82261 82260 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl36 | 2 | 75761-75874 75873 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoA | 2 | 74246-75262 75022 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoB | 6 | 23397-26612 24032 24881 24929 25895 26384 | CDS NA NA NA NA NA | - + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC1 | 4 | 20544-22208 22915-23346 23232 23345 | CDS CDS NA NA | - - + + | mRNA mRNA Unanotated Transcript Unanotated Transcript | NA NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC2 | 2 | 16100-20377 20146 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps11 | 2 | 75299-75691 75571 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps15 | 2 | 118794-119063 119062 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps16 | 3 | 3566-3796 3586 4588-4629 | CDS NA CDS | - + - | mRNA Unanotated Transcript mRNA | NA U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rps18 | 1 | 64062 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rps19 | 1 | 80059-80337 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| rps2 | 4 | 15256-15972 15258 15456 15543 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rps3 | 2 | 78900-79556 79511 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps4 | 2 | 44225-44845 44844 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps7 | 1 | 95283 | CDS | + | mRNA | C-to-U | GUG=>UUG | V=>L |
| rps8 | 3 | 76383-76781 76385 76780 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ycf1 | 3 | 119371-124482 123519 124481 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ycf2 | 8 | 101775 102672 104361 128409 130098 130995 133059 99711 | CDS CDS CDS NA NA NA NA CDS | + + + + + + + + | mRNA mRNA mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | UAA=>UCA UAA=>UCA UAA=>UCA NA=>NA NA=>NA NA=>NA NA=>NA UAA=>UCA | TERM=>S TERM=>S TERM=>S NA=>NA NA=>NA NA=>NA NA=>NA TERM=>S |
| ycf3 | 4 | 41580-41741 42366-42594 42554 43326-43450 | CDS CDS NA CDS | - - + - | mRNA mRNA Unanotated Transcript mRNA | NA NA U-to-C NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| ycf4 | 1 | 56795 | CDS | + | mRNA | C-to-U | CAA=>UAA | Q=>TERM |
( NA = Data Not Available )
Last update: Sep 2026
(version 2.0)