Species: | Alsophila spinulosa |
NCBI Taxonomy: | 204586 |
Organelle: | Chloroplast (NC_012818.1) |
Edited Genes: | 44 |
Editing Events: | 54 |
Gene | Editing Events | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
---|---|---|---|---|---|---|---|---|
accD | 1 | 57032-57964 | CDS | + | mRNA | NA | NA=>NA | NA=>NA |
atpA | 1 | 10130-11653 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
atpH | 1 | 13238-13483 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
atpI | 1 | 14235-14981 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
chlB | 1 | 5141-6682 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
chlL | 1 | 131410-132291 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
chlN | 1 | 129958-131352 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
infA | 1 | 79328-79573 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
matK | 1 | 1531-3033 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
ndhA | 2 | 122038-122595 120596-121153 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
ndhB | 2 | 574-1299 155618-156388 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
ndhC | 1 | 50644-51006 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
ndhE | 1 | 118774-119076 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
ndhF | 1 | 110687-112918 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
ndhG | 1 | 119173-119760 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
ndhH | 1 | 122597-123781 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
petA | 1 | 61535-62500 | CDS | + | mRNA | NA | NA=>NA | NA=>NA |
petB | 2 | 75179-75820 74366-74371 | CDS CDS | + + | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
petD | 2 | 76751-77225 76017-76024 | CDS CDS | + + | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
petN | 1 | 29896-29985 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
psaB | 1 | 39031-41235 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
psbE | 1 | 63787-64038 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
psbM | 1 | 28593-28697 | CDS | + | mRNA | NA | NA=>NA | NA=>NA |
psbN | 1 | 73798-73929 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
rpl2 | 2 | 85207-85603 84032-84468 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
rpl20 | 1 | 67425-67781 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
rpl21 | 1 | 113157-113513 | CDS | + | mRNA | NA | NA=>NA | NA=>NA |
rpl22 | 1 | 83321-83701 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
rpl23 | 1 | 85669-85950 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
rpl36 | 1 | 79069-79182 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
rpoA | 1 | 77545-78561 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
rpoB | 1 | 23253-26501 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
rpoC1 | 2 | 20404-22035 22767-23198 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
rpoC2 | 1 | 16029-20276 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
rps11 | 1 | 78605-78997 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
rps19 | 1 | 83719-83997 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
rps2 | 1 | 15151-15903 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
rps3 | 1 | 82547-83233 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
rps4 | 1 | 46737-47360 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
rps7 | 2 | 100106-100579 142391-142864 | CDS CDS | + - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
rps8 | 1 | 79711-80109 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
ycf1 | 1 | 124493-129589 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
ycf2 | 2 | 103228-109461 133509-139742 | CDS CDS | + - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
ycf3 | 3 | 43814-43978 45574-45697 44631-44860 | CDS CDS CDS | - - - | mRNA mRNA mRNA | NA NA NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
( NA = Data Not Available )