Lygodium japonicum - Plant Editosome Database - BIG Data Center

Summary

Gene Editing Events Genomic Position Region Strand RNA Type Codons Amino Acids
accD156275-57216CDS+mRNANANA=>NANA=>NA
atpA110796-12319CDS-mRNANANA=>NANA=>NA
atpB152216-53697CDS-mRNANANA=>NANA=>NA
atpH113932-14177CDS-mRNANANA=>NANA=>NA
atpI114846-15592CDS-mRNANANA=>NANA=>NA
chlB15573-7114CDS-mRNANANA=>NANA=>NA
chlL1131217-132098CDS-mRNANANA=>NANA=>NA
ndhA2121833-122390
120354-120914
CDS
CDS
-
-
mRNA
mRNA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
ndhB2596-1318
156261-157022
CDS
CDS
-
-
mRNA
mRNA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
ndhF1110507-112690CDS-mRNANANA=>NANA=>NA
ndhG1118762-119361CDS-mRNANANA=>NANA=>NA
ndhH1122392-123576CDS-mRNANANA=>NANA=>NA
petA160766-61728CDS+mRNANANA=>NANA=>NA
petB274249-74890
73414-73419
CDS
CDS
+
+
mRNA
mRNA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
petN127718-27807CDS+mRNANANA=>NANA=>NA
psbJ162324-62446CDS-mRNANANA=>NANA=>NA
psbM129379-29483CDS-mRNANANA=>NANA=>NA
psbN172856-72987CDS-mRNANANA=>NANA=>NA
rpl2283269-83705
84401-84797
CDS
CDS
-
-
mRNA
mRNA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rpl22182526-82939CDS-mRNANANA=>NANA=>NA
rpl23184848-85120CDS-mRNANANA=>NANA=>NA
rpoA176589-77599CDS-mRNANANA=>NANA=>NA
rpoB123100-26294CDS-mRNANANA=>NANA=>NA
rpoC1121036-23057CDS-mRNANANA=>NANA=>NA
rpoC2116633-20919CDS-mRNANANA=>NANA=>NA
rps125143049-143074
99635-99660
143674-143905
98804-99035
67884-68000
CDS
CDS
CDS
CDS
CDS
-
+
-
+
-
mRNA
mRNA
mRNA
mRNA
mRNA
NA
NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rps18166229-66456CDS+mRNANANA=>NANA=>NA
rps3181824-82480CDS-mRNANANA=>NANA=>NA
rps4145963-46586CDS-mRNANANA=>NANA=>NA
rps8178782-79180CDS-mRNANANA=>NANA=>NA
ycf22102831-108953
133756-139878
CDS
CDS
+
-
mRNA
mRNA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
ycf3344775-44900
43844-44071
43018-43182
CDS
CDS
CDS
-
-
-
mRNA
mRNA
mRNA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
ycf4158162-58725CDS+mRNANANA=>NANA=>NA

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)