psbC - Plant Editosome Database - BIG Data Center

Summary

Gene: psbC
Function: Photosystem II complex
Species: 59
Editing Types:
U-to-C (5)
C-to-U (4)
Editing Events: 68 (NA: 59   U-to-C: 5   C-to-U: 4)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Alloeochaete namuliensisChloroplast1
NA: 1
10101-11564CDS+NANA=>NANA=>NA
Alloeochaete oreogenaChloroplast1
NA: 1
10076-11539CDS+NANA=>NANA=>NA
Alloeochaete uluguruensisChloroplast1
NA: 1
10075-11538CDS+NANA=>NANA=>NA
Ampelopteris proliferaChloroplast1
NA: 1
31795-33216CDS-NANA=>NANA=>NA
Amphipogon caricinusChloroplast1
NA: 1
10024-11487CDS+NANA=>NANA=>NA
Amphipogon turbinatusChloroplast1
NA: 1
9704-11167CDS+NANA=>NANA=>NA
Anthoceros angustusChloroplast7
C-to-U: 2
U-to-C: 5
51206
51558
51609
51840
52070
52208
52452
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
C-to-U
UCU=>UUU
CUU=>CCU
UUC=>UCC
GUU=>GCU
UAU=>CAU
UGA=>CGA
CCU=>UCU
S=>F
L=>P
F=>S
V=>A
Y=>H
TERM=>R
P=>S
Apopellia endiviifoliaChloroplast1
C-to-U: 1
41369CDS+C-to-UCGU=>UGUR=>C
Asplenium pekinenseChloroplast1
NA: 1
31522-32943CDS-NANA=>NANA=>NA
Asplenium prolongatumChloroplast1
NA: 1
31463-32884CDS-NANA=>NANA=>NA
Athyrium anisopterumChloroplast1
NA: 1
31559-32980CDS-NANA=>NANA=>NA
Athyrium opacumChloroplast1
NA: 1
31502-32923CDS-NANA=>NANA=>NA
Athyrium sheareriChloroplast1
NA: 1
31519-32940CDS-NANA=>NANA=>NA
Athyrium sinenseChloroplast1
NA: 1
31543-32964CDS-NANA=>NANA=>NA
Austroblechnum melanocaulonChloroplast1
NA: 1
31696-33117CDS-NANA=>NANA=>NA
Chasmanthium laxumChloroplast1
NA: 1
10302-11765CDS+NANA=>NANA=>NA
Christella appendiculataChloroplast1
NA: 1
31616-33037CDS-NANA=>NANA=>NA
Coelachne africanaChloroplast1
NA: 1
9594-11057CDS+NANA=>NANA=>NA
Crinipes abyssinicusChloroplast1
NA: 1
10376-11839CDS+NANA=>NANA=>NA
Crinipes longifoliusChloroplast1
NA: 1
10365-11828CDS+NANA=>NANA=>NA
Cyrtomium devexiscapulaeChloroplast1
NA: 1
31589-33010CDS-NANA=>NANA=>NA
Cyrtomium falcatumChloroplast1
NA: 1
31728-33149CDS-NANA=>NANA=>NA
Cystopteris chinensisChloroplast1
NA: 1
31563-32984CDS-NANA=>NANA=>NA
Deparia lanceaChloroplast1
NA: 1
31196-32617CDS-NANA=>NANA=>NA
Deparia pycnosoraChloroplast1
NA: 1
31528-32949CDS-NANA=>NANA=>NA
Deparia viridifronsChloroplast1
NA: 1
31534-32955CDS-NANA=>NANA=>NA
Dichaetaria wightiiChloroplast1
NA: 1
10198-11661CDS+NANA=>NANA=>NA
Diplaziopsis cavalerianaChloroplast1
NA: 1
32025-33446CDS-NANA=>NANA=>NA
Diplaziopsis javanicaChloroplast1
NA: 1
32123-33544CDS-NANA=>NANA=>NA
Diplazium bellumChloroplast1
NA: 1
31553-32974CDS-NANA=>NANA=>NA
Diplazium dilatatumChloroplast1
NA: 1
31322-32743CDS-NANA=>NANA=>NA
Diplazium dushanenseChloroplast1
NA: 1
31494-32915CDS-NANA=>NANA=>NA
Diplazium unilobumChloroplast1
NA: 1
31495-32916CDS-NANA=>NANA=>NA
Dryopteris decipiensChloroplast1
NA: 1
31630-33051CDS-NANA=>NANA=>NA
Elytrophorus globularisChloroplast1
NA: 1
9952-11415CDS+NANA=>NANA=>NA
Eragrostis walteriChloroplast1
NA: 1
10075-11538CDS+NANA=>NANA=>NA
Eriachne mucronataChloroplast1
NA: 1
9990-11453CDS+NANA=>NANA=>NA
Homalosorus pycnocarposChloroplast1
NA: 1
32101-33522CDS-NANA=>NANA=>NA
Hymenasplenium unilateraleChloroplast1
NA: 1
31529-32950CDS-NANA=>NANA=>NA
Hypodematium crenatumChloroplast1
NA: 1
31688-33109CDS-NANA=>NANA=>NA
Isachne albensChloroplast1
NA: 1
9601-11064CDS+NANA=>NANA=>NA
Lepisorus clathratusChloroplast1
NA: 1
30572-31993CDS-NANA=>NANA=>NA
Limnopoa meeboldiiChloroplast1
NA: 1
9561-11024CDS+NANA=>NANA=>NA
Macrothelypteris torresianaChloroplast1
NA: 1
31633-33054CDS-NANA=>NANA=>NA
Marsilea crenataChloroplast1
NA: 1
35471-36934CDS-NANA=>NANA=>NA
Matteuccia struthiopterisChloroplast1
NA: 1
31823-33244CDS-NANA=>NANA=>NA
Myriopteris lindheimeriChloroplast1
C-to-U: 1
33276CDS-C-to-UACG=>AUGT=>M
Nematopoa longipesChloroplast1
NA: 1
9926-11389CDS+NANA=>NANA=>NA
Nothoceros aenigmaticusPlastid2
NA: 2
52559-53980NA
NA
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Onoclea sensibilisChloroplast1
NA: 1
31605-33026CDS-NANA=>NANA=>NA
Phaenanthoecium koestliniiChloroplast1
NA: 1
9729-11192CDS+NANA=>NANA=>NA
Pseudophegopteris auritaChloroplast1
NA: 1
31296-32717CDS-NANA=>NANA=>NA
Pteridium aquilinum subsp. aquilinumChloroplast1
NA: 1
31736-33157CDS-NANA=>NANA=>NA
Rhachidosorus consimilisChloroplast1
NA: 1
32136-33557CDS-NANA=>NANA=>NA
Stegnogramma sagittifoliaChloroplast1
NA: 1
31620-33041CDS-NANA=>NANA=>NA
Styppeiochloa gynoglossaChloroplast1
NA: 1
10382-11845CDS+NANA=>NANA=>NA
Woodsia macrochlaenaChloroplast1
NA: 1
31424-32845CDS-NANA=>NANA=>NA
Woodsia polystichoidesChloroplast1
NA: 1
31248-32669CDS-NANA=>NANA=>NA
Woodwardia unigemmataChloroplast1
NA: 1
31664-33085CDS-NANA=>NANA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)