Species: | Hymenasplenium unilaterale |
NCBI Taxonomy: | 147939 |
Organelle: | Chloroplast (NC_035856.1) |
Edited Genes: | 57 |
Editing Events: | 125 |
Gene | Editing Events | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
---|---|---|---|---|---|---|---|---|
accD | 2 | 55249 56027 | CDS CDS | + + | mRNA mRNA | C-to-U U-to-C | ACG=>AUG UAA=>UAC | T=>M TERM=>Y |
atpA | 2 | 11451 10030-11553 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
atpB | 2 | 51133-52614 52613 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
atpF | 3 | 12772-12916 11633-12042 12915 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
atpH | 2 | 13263-13508 13507 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
atpI | 2 | 14976 14299-15045 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
ccsA | 1 | 111074 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
chlB | 3 | 4675-6219 5970 5838 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
chlL | 4 | 127353-128255 127355 128254 127532 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
chlN | 1 | 125901-127286 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
infA | 3 | 76900 76954 76784-77020 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
matK | 2 | 1189-2685 2427 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
ndhA | 2 | 116490-117047 117975-118532 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
ndhC | 2 | 48899-49261 48901 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
ndhD | 1 | 112431-113939 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
ndhE | 1 | 114673-114975 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
ndhF | 4 | 106863-109073 108713 108437 109072 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
ndhG | 2 | 115050-115649 115648 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
ndhH | 1 | 118534-119712 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
ndhI | 2 | 115811-116341 116197 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
ndhK | 1 | 48177-48908 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
petA | 1 | 59741 | CDS | + | mRNA | U-to-C | UAG=>UCG | TERM=>S |
petB | 2 | 72803-73444 72006-72011 | CDS CDS | + + | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
petD | 2 | 74293-74764 73650-73654 | CDS CDS | + + | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
petN | 1 | 29267-29356 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
psaB | 2 | 38652 36449-38653 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
psaC | 1 | 114082-114327 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
psbB | 2 | 69381 70904 | CDS CDS | + + | mRNA mRNA | C-to-U C-to-U | ACG=>AUG CAA=>UAA | T=>M Q=>TERM |
psbC | 1 | 31529-32950 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
psbD | 1 | 32922 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
psbE | 2 | 61773-62024 61973 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
psbF | 1 | 61644-61763 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
psbH | 1 | 71645 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
psbL | 2 | 61506-61622 61621 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
psbM | 1 | 28302 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
psbT | 1 | 71167 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
rpl14 | 3 | 77749 78114 77747-78115 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | C-to-U C-to-U NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
rpl2 | 4 | 82314-82710 81150-81583 81524 82701 | CDS CDS NA NA | - - + + | mRNA mRNA Unanotated Transcript Unanotated Transcript | NA NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
rpl22 | 3 | 80434-80805 80804 80559 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
rpl23 | 2 | 83050 82779-83051 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
rpl36 | 2 | 76653 76541-76654 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
rpoA | 2 | 75795 75028-76035 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
rpoB | 6 | 23335-26550 25833 26322 24819 26424 24867 | CDS NA NA NA NA NA | - + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
rpoC1 | 3 | 23170 20478-22142 22853-23284 | NA CDS CDS | + - - | Unanotated Transcript mRNA mRNA | U-to-C NA NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
rpoC2 | 2 | 20125 16067-20356 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
rps11 | 2 | 76073-76465 76345 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
rps16 | 3 | 4474-4515 3424-3654 4514 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
rps18 | 1 | 64739 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
rps19 | 1 | 80823-81101 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
rps2 | 4 | 15565 15442 15529 15242-15958 | NA NA NA CDS | + + + - | Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
rps3 | 2 | 79653-80312 80311 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
rps4 | 3 | 43971-44591 44590 44390 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
rps7 | 2 | 138463 96643 | NA CDS | + + | Unanotated Transcript mRNA | U-to-C U-to-C | NA=>NA UAA=>UAC | NA=>NA TERM=>Y |
ycf1 | 3 | 120417-125549 124580 125548 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
ycf2 | 8 | 134427 134214 135585 131253 99521 103853 100892 100679 | NA NA NA NA CDS CDS CDS CDS | + + + + + + + + | Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA mRNA mRNA mRNA | U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA UGA=>UGC UAA=>UAC UAA=>UAC UAA=>UAC | NA=>NA NA=>NA NA=>NA NA=>NA TERM=>C TERM=>Y TERM=>Y TERM=>Y |
ycf3 | 4 | 43015-43139 42050-42278 41268-41429 42238 | CDS CDS CDS NA | - - - + | mRNA mRNA mRNA Unanotated Transcript | NA NA NA U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
ycf4 | 1 | 57570 | CDS | + | mRNA | C-to-U | CGA=>UGA | R=>TERM |
( NA = Data Not Available )