psbD - Plant Editosome Database - BIG Data Center

Summary

Gene: psbD
Function: Photosystem II complex
Species: 39
Editing Types:
C-to-U (42)
U-to-C (6)
Editing Events: 54 (C-to-U: 42   NA: 6   U-to-C: 6)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Ampelopteris proliferaChloroplast1
C-to-U: 1
33215NA+C-to-UNA=>NANA=>NA
Anthoceros angustusChloroplast11
C-to-U: 5
U-to-C: 6
50110
50206
50416
50443
50471
50570
50590
50674
50818
50966
51076
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
U-to-C
U-to-C
C-to-U
C-to-U
U-to-C
C-to-U
U-to-C
U-to-C
U-to-C
C-to-U
CGG=>UGG
UAA=>CAA
UGC=>CGC
UCU=>UUU
UCU=>UUU
UGU=>CGU
UCU=>UUU
UGC=>CGC
UAU=>CAU
UAA=>CAA
CCU=>UCU
R=>W
TERM=>Q
C=>R
S=>F
S=>F
C=>R
S=>F
C=>R
Y=>H
TERM=>Q
P=>S
Asplenium pekinenseChloroplast1
C-to-U: 1
32942NA+C-to-UNA=>NANA=>NA
Asplenium prolongatumChloroplast1
C-to-U: 1
32883NA+C-to-UNA=>NANA=>NA
Athyrium anisopterumChloroplast1
C-to-U: 1
32979NA+C-to-UNA=>NANA=>NA
Athyrium sheareriChloroplast1
C-to-U: 1
32939NA+C-to-UNA=>NANA=>NA
Athyrium sinenseChloroplast1
C-to-U: 1
32963NA+C-to-UNA=>NANA=>NA
Austroblechnum melanocaulonChloroplast1
C-to-U: 1
33116NA+C-to-UNA=>NANA=>NA
Christella appendiculataChloroplast1
C-to-U: 1
33036NA+C-to-UNA=>NANA=>NA
Cyrtomium devexiscapulaeChloroplast1
C-to-U: 1
33009NA+C-to-UNA=>NANA=>NA
Cyrtomium falcatumChloroplast1
C-to-U: 1
33148NA+C-to-UNA=>NANA=>NA
Cystopteris chinensisChloroplast1
C-to-U: 1
32983NA+C-to-UNA=>NANA=>NA
Deparia lanceaChloroplast1
C-to-U: 1
32616NA+C-to-UNA=>NANA=>NA
Deparia pycnosoraChloroplast1
C-to-U: 1
32948NA+C-to-UNA=>NANA=>NA
Deparia viridifronsChloroplast1
C-to-U: 1
32954NA+C-to-UNA=>NANA=>NA
Diplaziopsis cavalerianaChloroplast1
C-to-U: 1
33445NA+C-to-UNA=>NANA=>NA
Diplaziopsis javanicaChloroplast1
C-to-U: 1
33494NA+C-to-UNA=>NANA=>NA
Diplazium bellumChloroplast1
C-to-U: 1
32973NA+C-to-UNA=>NANA=>NA
Diplazium dilatatumChloroplast1
C-to-U: 1
32742NA+C-to-UNA=>NANA=>NA
Diplazium dushanenseChloroplast1
C-to-U: 1
32914NA+C-to-UNA=>NANA=>NA
Diplazium unilobumChloroplast1
C-to-U: 1
32915NA+C-to-UNA=>NANA=>NA
Dryopteris decipiensChloroplast1
C-to-U: 1
33050NA+C-to-UNA=>NANA=>NA
Hevea brasiliensisChloroplast1
C-to-U: 1
36579CDS+C-to-UAUC=>AUUI=>I
Homalosorus pycnocarposChloroplast1
C-to-U: 1
33521NA+C-to-UNA=>NANA=>NA
Hymenasplenium unilateraleChloroplast1
C-to-U: 1
32922NA+C-to-UNA=>NANA=>NA
Hypodematium crenatumChloroplast1
C-to-U: 1
33108NA+C-to-UNA=>NANA=>NA
Lepisorus clathratusChloroplast1
C-to-U: 1
31992NA+C-to-UNA=>NANA=>NA
Macrothelypteris torresianaChloroplast1
C-to-U: 1
33053NA+C-to-UNA=>NANA=>NA
Matteuccia struthiopterisChloroplast1
C-to-U: 1
33243NA+C-to-UNA=>NANA=>NA
Nothoceros aenigmaticusPlastid2
NA: 2
51550-52611NA
NA
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Onoclea sensibilisChloroplast1
C-to-U: 1
33025NA+C-to-UNA=>NANA=>NA
Pseudophegopteris auritaChloroplast1
C-to-U: 1
32716NA+C-to-UNA=>NANA=>NA
Pteridium aquilinum subsp. aquilinumChloroplast3
C-to-U: 2
NA: 1
33105-34166
33156
34165
NA
CDS
NA
+
-
C-to-U
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhachidosorus consimilisChloroplast1
C-to-U: 1
33556NA+C-to-UNA=>NANA=>NA
Stegnogramma sagittifoliaChloroplast1
C-to-U: 1
33040NA+C-to-UNA=>NANA=>NA
Takakia lepidozioidesChloroplast1
NA: 1
50161-51222NA+NANA=>NANA=>NA
Woodsia macrochlaenaChloroplast1
C-to-U: 1
32844NA+C-to-UNA=>NANA=>NA
Woodsia polystichoidesChloroplast1
C-to-U: 1
32668NA+C-to-UNA=>NANA=>NA
Woodwardia unigemmataChloroplast1
C-to-U: 1
33084NA+C-to-UNA=>NANA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)