Hevea brasiliensis - Plant Editosome Database - BIG Data Center

Summary

Gene Editing Events Genomic Position Region Strand RNA Type Codons Amino Acids
atpI127388CDS+mRNAC-to-UUCA=>UUAS=>L
cemA164759CDS+mRNAC-to-UACG=>AUGT=>M
clpP174527CDS-mRNAC-to-UCAU=>UAUH=>Y
matK32738
3272
3757
CDS
CDS
CDS
-
-
-
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
CGG=>UGG
CAU=>UAU
UCU=>UUU
R=>W
H=>Y
S=>F
ndhA2126414
126019
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
CCU=>UCU
S=>L
P=>S
ndhB11147741
147785
147810
147945
148029
147258
148454
148489
148680
147666
147348
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
A-to-G
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
ACG=>AUG
CAU=>UAU
UCG=>UUG
UCU=>UUU
UCA=>UUA
AAA=>AGA
CAU=>UAU
UAU=>UAC
CCA=>CUA
CCA=>CUA
UCA=>UUA
T=>M
H=>Y
S=>L
S=>F
S=>L
K=>R
H=>Y
Y=>Y
P=>L
P=>L
S=>L
ndhC153433CDS-mRNAC-to-UUCA=>UUAS=>L
ndhD5122304
122313
122517
122592
122878
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCU=>CUU
UCA=>UUA
UCA=>UUA
UCA=>UUA
CGG=>UGG
P=>L
S=>L
S=>L
S=>L
R=>W
ndhE1123898CDS-mRNAC-to-UCCA=>CUAP=>L
ndhG1124549CDS-mRNAC-to-UCCA=>CUAP=>L
ndhH1128765CDS-mRNAC-to-UCAU=>UAUH=>Y
ndhK153277CDS-mRNAC-to-UUCA=>UUAS=>L
petB280857
79650
CDS
Intron
+
NA
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
NA=>NA
S=>L
NA=>NA
petD182437CDS+mRNAC-to-UCAA=>UAAQ=>TERM
petL169927CDS+mRNAC-to-UCCU=>CUUP=>L
psbB177439CDS+mRNAC-to-UAUC=>AUUI=>I
psbD136579CDS+mRNAC-to-UAUC=>AUUI=>I
psbE168345CDS-mRNAC-to-UCCU=>UCUP=>S
rpl231159029CDS+mRNAC-to-UUCA=>UUAS=>L
rpoA283467
82831
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
UCU=>UUU
UCA=>UUA
S=>F
S=>L
rpoB115670CDS+mRNAC-to-UUCA=>UUAS=>L
rpoC1119184CDS+mRNAC-to-UUCA=>UUAS=>L
rpoC2125100CDS+mRNAC-to-UUCA=>UUAS=>L
rps121NAIntronNAmRNAC-to-UNA=>NANA=>NA
rps14240575
40644
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
CCA=>CUA
UCA=>UUA
P=>L
S=>L
rps1616032IntronNAmRNAC-to-UNA=>NANA=>NA
rps18172605CDS+mRNAC-to-UUCG=>UUGS=>L
rps2226061
25947
CDS
CDS
+
+
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
ACA=>AUA
S=>L
T=>I

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)