Difference between revisions of "LncRNAWiki:Featured"

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Line 81: Line 81:
 
|Antisense of IGF2R non-protein coding RNA
 
|Antisense of IGF2R non-protein coding RNA
 
|-
 
|-
−
|''Alpha 250/Alpha 280''
+
|''Alpha 250''/''Alpha 280''
−
|[[NONHSAT104559,lnc-NDST1-1:2]]
+
|[[NONHSAT104559]],[[lnc-NDST1-1:2]]
 
|N/A
 
|N/A
 
|N/A
 
|N/A
Line 92: Line 92:
 
|-
 
|-
 
|''APOA1-AS''
 
|''APOA1-AS''
−
|[[APOA1-AS]]
+
|[[ENST00000444200.1]]
 
|APOA1 antisense RNA
 
|APOA1 antisense RNA
 
|N/A
 
|N/A
 
|-
 
|-
 
|''APTR''
 
|''APTR''
−
|[[APTR]]
+
|[[NONHSAT121673]]
 
|Alu-mediated CDKN1A/p21
 
|Alu-mediated CDKN1A/p21
 
|N/A
 
|N/A
Line 142: Line 142:
 
|-
 
|-
 
|''BACE1-AS''
 
|''BACE1-AS''
−
|[[NONHSAT024403,lnc-RNF214-1:2]]
+
|[[NONHSAT024403]],[[lnc-RNF214-1:2]]
 
|BACE1AS,NCRNA00177; FJ573250
 
|BACE1AS,NCRNA00177; FJ573250
 
|BACE1 antisense RNA
 
|BACE1 antisense RNA
Line 167: Line 167:
 
|-
 
|-
 
|''Beta-globin transcripts''
 
|''Beta-globin transcripts''
−
|[[NONHSAT017676,NONHSAT017675,NONHSAT017674]]
+
|[[NONHSAT017676]],[[NONHSAT017675]],[[NONHSAT017674]]
 
|N/A
 
|N/A
 
|N/A
 
|N/A
Line 212: Line 212:
 
|-
 
|-
 
|''BPESC1''
 
|''BPESC1''
−
|[[BPESC1]]
+
|[[ENST00000418282.1]]
 
|NCRNA00187
 
|NCRNA00187
 
|blepharophimosis, epicanthus inversus and ptosis, candidate 1 (non-protein coding)
 
|blepharophimosis, epicanthus inversus and ptosis, candidate 1 (non-protein coding)
Line 262: Line 262:
 
|-
 
|-
 
|''CAR Intergenic 10''
 
|''CAR Intergenic 10''
−
|[[NONHSAT016928,lnc-FANK1-3:1]]
+
|[[NONHSAT016928]],[[lnc-FANK1-3:1]]
 
|Intergenic10, CR611911, AK055628
 
|Intergenic10, CR611911, AK055628
 
|Chromatin Associated RNA 10
 
|Chromatin Associated RNA 10
Line 322: Line 322:
 
|-
 
|-
 
|''CCAT1''
 
|''CCAT1''
−
|[[CCAT1]]
+
|[[NONHSAT129017]]
 
|CARLo-5, onco-lncRNA-40
 
|CARLo-5, onco-lncRNA-40
 
|colon cancer associated transcript 1 (non-protein coding)
 
|colon cancer associated transcript 1 (non-protein coding)
Line 352: Line 352:
 
|-
 
|-
 
|''CDKN2B-AS1''
 
|''CDKN2B-AS1''
−
|[[NONHSAT130421,lnc-C9orf53-2:1]]
+
|[[NONHSAT130421]],[[lnc-C9orf53-2:1]]
 
|ANRIL, p15AS, ENSG00000240498
 
|ANRIL, p15AS, ENSG00000240498
 
|CDKN2B antisense RNA 1
 
|CDKN2B antisense RNA 1
Line 402: Line 402:
 
|-
 
|-
 
|''CISTR''
 
|''CISTR''
−
|[[CISTR]]
+
|[[NONHSAT028496]]
 
|CISTR-ACT, CISTRACT, re52431
 
|CISTR-ACT, CISTRACT, re52431
 
|chondrogenesis-associated transcript
 
|chondrogenesis-associated transcript
Line 422: Line 422:
 
|-
 
|-
 
|''CRNDE''
 
|''CRNDE''
−
|[[CRNDE]]
+
|[[Lnc-IRX3-4:2]]
 
|LOC643911, LINC00180, CRNDEP
 
|LOC643911, LINC00180, CRNDEP
 
|colorectal neoplasia differentially expressed (non-protein coding)
 
|colorectal neoplasia differentially expressed (non-protein coding)
Line 462: Line 462:
 
|-
 
|-
 
|''CYYR1-AS1''
 
|''CYYR1-AS1''
−
|[[CYYR1-AS1]]
+
|[[ENST00000357401.3]]
 
|cysteine and tyrosine rich 1 antisense RNA 1
 
|cysteine and tyrosine rich 1 antisense RNA 1
 
|N/A
 
|N/A
Line 502: Line 502:
 
|-
 
|-
 
|''DBET''
 
|''DBET''
−
|[[DBET]]
+
|[[NONHSAT099821]]
 
|DBE-T, DUX4L30
 
|DBE-T, DUX4L30
 
|D4Z4 binding element transcript (non-protein coding)
 
|D4Z4 binding element transcript (non-protein coding)
Line 542: Line 542:
 
|-
 
|-
 
|''DHRS4-AS1''
 
|''DHRS4-AS1''
−
|[[DHRS4-AS1]]
+
|[[NONHSAT035954]]
 
|DHRS4 antisense RNA 1
 
|DHRS4 antisense RNA 1
 
|PRO1488,AS1DHRS4
 
|PRO1488,AS1DHRS4
Line 552: Line 552:
 
|-
 
|-
 
|''DIO3OS''
 
|''DIO3OS''
−
|[[NONHSAT040032,NONHSAT040039]]
+
|[[NONHSAT040032]],[[NONHSAT040039]]
 
|DIO3-AS1, NCRNA00041, non-protein coding RNA 41, ENSG00000258498
 
|DIO3-AS1, NCRNA00041, non-protein coding RNA 41, ENSG00000258498
 
|DIO3 opposite strand/antisense RNA (head to head)
 
|DIO3 opposite strand/antisense RNA (head to head)
Line 567: Line 567:
 
|-
 
|-
 
|''DLEU1''
 
|''DLEU1''
−
|[[DLEU1]]
+
|[[NONHSAT033797]]
 
|deleted in lymphocytic leukemia 1 (non-protein coding)
 
|deleted in lymphocytic leukemia 1 (non-protein coding)
 
|LEU1, XTP6, NCRNA00021, LINC00021, BCMS1
 
|LEU1, XTP6, NCRNA00021, LINC00021, BCMS1
 
|-
 
|-
 
|''DLEU2''
 
|''DLEU2''
−
|[[DLEU2]]
+
|[[NONHSAT033821]]
 
|deleted in lymphocytic leukemia 2 (non-protein coding)
 
|deleted in lymphocytic leukemia 2 (non-protein coding)
 
|LEU2, TRIM13OS, NCRNA00022, LINC00022, MIR15AHG
 
|LEU2, TRIM13OS, NCRNA00022, LINC00022, MIR15AHG
Line 657: Line 657:
 
|-
 
|-
 
|''ERICD''
 
|''ERICD''
−
|[[ERICD]]
+
|[[Lnc-CHRAC1-2:1]]
 
|TCONS_00014875, ERIC
 
|TCONS_00014875, ERIC
 
|E2F1-regulated inhibitor of cell death (non-protein coding)
 
|E2F1-regulated inhibitor of cell death (non-protein coding)
Line 667: Line 667:
 
|-
 
|-
 
|''ESRG''
 
|''ESRG''
−
|[[ESRG]]
+
|[[ENST00000583516.1]]
 
|HESRG
 
|HESRG
 
|embryonic stem cell related (non-protein coding)
 
|embryonic stem cell related (non-protein coding)
Line 817: Line 817:
 
|-
 
|-
 
|''FIRRE''
 
|''FIRRE''
−
|[[FIRRE]]
+
|[[ENST00000427391.1]]
 
|firre intergenic repeating RNA element
 
|firre intergenic repeating RNA element
 
|LINC01200
 
|LINC01200
Line 842: Line 842:
 
|-
 
|-
 
|''FOXCUT''
 
|''FOXCUT''
−
|[[FOXCUT]]
+
|[[Lnc-FOXC1-1:1]],[[NONHSAT106529]]
 
|TCONS_00011636
 
|TCONS_00011636
 
|FOXC1 upstream transcript (non-protein coding)
 
|FOXC1 upstream transcript (non-protein coding)
Line 857: Line 857:
 
|-
 
|-
 
|''FTX''
 
|''FTX''
−
|[[FTX]]
+
|[[ENST00000602812.1]]
 
|LINC00182,FLJ33139
 
|LINC00182,FLJ33139
 
|FTX transcript, XIST regulator (non-protein coding)
 
|FTX transcript, XIST regulator (non-protein coding)
Line 867: Line 867:
 
|-
 
|-
 
|''GACAT1''
 
|''GACAT1''
−
|[[GACAT1]]
+
|[[ENST00000441383.1]]
 
|LINC00876, AC096655.1-002
 
|LINC00876, AC096655.1-002
 
|gastric cancer associated transcript 1 (non-protein coding)
 
|gastric cancer associated transcript 1 (non-protein coding)
 
|-
 
|-
 
|''GACAT2''
 
|''GACAT2''
−
|[[GACAT2]]
+
|[[ENST00000579368.1]]
 
|HMlincRNA717
 
|HMlincRNA717
 
|gastric cancer associated transcript 2 (non-protein coding)
 
|gastric cancer associated transcript 2 (non-protein coding)
 
|-
 
|-
 
|''GACAT3''
 
|''GACAT3''
−
|[[GACAT3]]
+
|[[ENST00000426539.1]]
 
|lncRNA-AC130710
 
|lncRNA-AC130710
 
|gastric cancer associated transcript 3 (non-protein coding)
 
|gastric cancer associated transcript 3 (non-protein coding)
Line 927: Line 927:
 
|-
 
|-
 
|''GHRLOS''
 
|''GHRLOS''
−
|[[GHRLOS]]
+
|[[NONHSAT087920]]
 
|NCRNA00068,GHRL-AS1
 
|NCRNA00068,GHRL-AS1
 
|ghrelin opposite strand/antisense RNA
 
|ghrelin opposite strand/antisense RNA
Line 952: Line 952:
 
|-
 
|-
 
|''GPR1-AS''
 
|''GPR1-AS''
−
|[[GPR1-AS]]
+
|[[NONHSAT076558]]
 
|GPR1AS
 
|GPR1AS
 
|GPR1 antisense RNA
 
|GPR1 antisense RNA
Line 972: Line 972:
 
|-
 
|-
 
|''HAGLR''
 
|''HAGLR''
−
|[[HAGLR]]
+
|[[ENST00000416928.2]],[[NONHSAT075638]]
 
|Mdgt
 
|Mdgt
 
|HOXD antisense growth-associated long non-coding RNA
 
|HOXD antisense growth-associated long non-coding RNA
Line 1,172: Line 1,172:
 
|-
 
|-
 
|''KANTR''
 
|''KANTR''
−
|[[KANTR]]
+
|[[ENST00000604849.1]]
 
|KDM5C adjacent non-coding transcript
 
|KDM5C adjacent non-coding transcript
 
|Spasm
 
|Spasm
Line 1,382: Line 1,382:
 
|-
 
|-
 
|''LINC00312''
 
|''LINC00312''
−
|[[LINC00312]]
+
|[[NONHSAT087716]]
 
|NAG7, NAG-7, ERR10, LMCD1DN, ERR-10
 
|NAG7, NAG-7, ERR10, LMCD1DN, ERR-10
 
|long intergenic non-protein coding RNA 312
 
|long intergenic non-protein coding RNA 312
Line 1,557: Line 1,557:
 
|-
 
|-
 
|''LINC00570''
 
|''LINC00570''
−
|[[ENST00000437795.1,ENST00000432665.1,ENST00000453100.1,ENST00000417473.2]]
+
|[[ENST00000437795.1]],ENST00000432665.1,[[ENST00000453100.1]],[[ENST00000417473.2]]
 
|KDM5BAS1, ncRNA-a2, onco-lncRNA-96, PCAN-R1, prostate cancer-associated noncoding RNA 1,ENSG00000224177,
 
|KDM5BAS1, ncRNA-a2, onco-lncRNA-96, PCAN-R1, prostate cancer-associated noncoding RNA 1,ENSG00000224177,
 
|prostate cancer associated transcript 6 (non-protein coding)
 
|prostate cancer associated transcript 6 (non-protein coding)
Line 1,567: Line 1,567:
 
|-
 
|-
 
|''LINC00581''
 
|''LINC00581''
−
|[[lnc-PRL-6:2,lnc-PRL-6:1]]
+
|[[lnc-PRL-6:2]],[[lnc-PRL-6:1]]
 
|BX118339,Hs.112750, linc-MBOAT1-4: TCONS_00012107, linc-MBOAT1-4: TCONS_00012678
 
|BX118339,Hs.112750, linc-MBOAT1-4: TCONS_00012107, linc-MBOAT1-4: TCONS_00012678
 
|long intergenic non-protein coding RNA 581
 
|long intergenic non-protein coding RNA 581
Line 1,997: Line 1,997:
 
|-
 
|-
 
|''LINC01191''
 
|''LINC01191''
−
|[[LINC01191]]
+
|[[ENST00000412690.1]]
 
|VIN, lnc-ACTR3
 
|VIN, lnc-ACTR3
 
|long intergenic non-protein coding RNA 1191
 
|long intergenic non-protein coding RNA 1191
Line 2,317: Line 2,317:
 
|-
 
|-
 
|''LINC-PINT''
 
|''LINC-PINT''
−
|[[LINC-PINT]]
+
|[[NONHSAT123382]]
 
|FLJ43663, PINT, LincRNA-Pint
 
|FLJ43663, PINT, LincRNA-Pint
 
|long intergenic non-protein coding RNA, p53 induced transcript
 
|long intergenic non-protein coding RNA, p53 induced transcript
Line 2,377: Line 2,377:
 
|-
 
|-
 
|''LUCAT1''
 
|''LUCAT1''
−
|[[LUCAT1]]
+
|[[ENST00000511918.1]]
 
|SCAL1
 
|SCAL1
 
|lung cancer associated transcript 1 (non-protein coding)
 
|lung cancer associated transcript 1 (non-protein coding)
Line 2,447: Line 2,447:
 
|-
 
|-
 
|''MEG9''
 
|''MEG9''
−
|[[MEG9]]
+
|[[ENST00000553584.1]],[[
 
|LINC00584
 
|LINC00584
 
|maternally expressed 9 (non-protein coding)
 
|maternally expressed 9 (non-protein coding)
Line 2,482: Line 2,482:
 
|-
 
|-
 
|''MINCR''
 
|''MINCR''
−
|[[MINCR]]
+
|[[ENST00000517411.1]]
 
|TCONSN/A00015189
 
|TCONSN/A00015189
 
|MYC-induced long noncoding RNA
 
|MYC-induced long noncoding RNA
 
|-
 
|-
 
|''MIR100HG''
 
|''MIR100HG''
−
|[[MIR100HG]]
+
|[[ENST00000531381.1]]
 
|AGD1, lncRNA-N2
 
|AGD1, lncRNA-N2
 
|mir-100-let-7a-2 cluster host gene
 
|mir-100-let-7a-2 cluster host gene
Line 2,497: Line 2,497:
 
|-
 
|-
 
|''MIR155HG''
 
|''MIR155HG''
−
|[[MIR155HG]]
+
|[[NONHSAT081499]]
 
|BIC, NCRNA00172
 
|BIC, NCRNA00172
 
|MIR155 host gene
 
|MIR155 host gene
Line 2,517: Line 2,517:
 
|-
 
|-
 
|''MIR222HG''
 
|''MIR222HG''
−
|[[MIR222HG]]
+
|[[ENST00000602507.1]]
 
|Lnc-Ang362
 
|Lnc-Ang362
 
|MIR222 host gene
 
|MIR222 host gene
 
|-
 
|-
 
|''MIR22HG''
 
|''MIR22HG''
−
|[[MIR22HG]]
+
|[[ENST00000574306.1]]
 
|MGC14376, DKFZp686O06159, LOC554202
 
|MGC14376, DKFZp686O06159, LOC554202
 
|MIR22 host gene
 
|MIR22 host gene
Line 2,557: Line 2,557:
 
|-
 
|-
 
|''MIR99AHG''
 
|''MIR99AHG''
−
|[[MIR99AHG]]
+
|[[ENST00000602580.1]]
 
|MONC
 
|MONC
 
|mir-99a-let-7c cluster host gene
 
|mir-99a-let-7c cluster host gene
Line 2,602: Line 2,602:
 
|-
 
|-
 
|''MYCNUT''
 
|''MYCNUT''
−
|[[MYCNUT]]
+
|[[ENST00000433810.1]]
 
|lncUSMycN
 
|lncUSMycN
 
|MYCN upstream transcript (non-protein coding)
 
|MYCN upstream transcript (non-protein coding)
Line 2,617: Line 2,617:
 
|-
 
|-
 
|''NAMA''
 
|''NAMA''
−
|[[NAMA]]
+
|[[ENST00000604258.1]]
 
|N/A
 
|N/A
 
|non-protein coding RNA, associated with MAP kinase pathway and growth arrest
 
|non-protein coding RNA, associated with MAP kinase pathway and growth arrest
Line 2,657: Line 2,657:
 
|-
 
|-
 
|''NEAT1''
 
|''NEAT1''
−
|[[ENST00000501122.2,NONHSAT022111]]
+
|[[ENST00000501122.2]],[[NONHSAT022111]]
 
|MEN epsilon/beta, VINC, TncRNA, linc1317, ENSG00000245532
 
|MEN epsilon/beta, VINC, TncRNA, linc1317, ENSG00000245532
 
|Nuclear enriched abundant transcript 1.
 
|Nuclear enriched abundant transcript 1.
Line 2,722: Line 2,722:
 
|-
 
|-
 
|''NRIR''
 
|''NRIR''
−
|[[NRIR]]
+
|[[ENST00000414795.1]]
 
|lncRNA-CMPK2
 
|lncRNA-CMPK2
 
|negative regulator of interferon response (non-protein coding)
 
|negative regulator of interferon response (non-protein coding)
Line 2,752: Line 2,752:
 
|-
 
|-
 
|''OVAAL''
 
|''OVAAL''
−
|[[OVAAL]]
+
|[[ENST00000442621.1]]
 
|LINC01131,OVAL
 
|LINC01131,OVAL
 
|ovarian adenocarcinoma amplified long non-coding RNA
 
|ovarian adenocarcinoma amplified long non-coding RNA
 
|-
 
|-
 
|''PACERR''
 
|''PACERR''
−
|[[PACERR]]
+
|[[ENST00000608917.1]]
 
|PACER, PTGS2-AS1
 
|PACER, PTGS2-AS1
 
|PTGS2 antisense NFKB1 complex-mediated expression regulator RNA
 
|PTGS2 antisense NFKB1 complex-mediated expression regulator RNA
Line 2,782: Line 2,782:
 
|-
 
|-
 
|''PART1''
 
|''PART1''
−
|[[PART1]]
+
|[[ENST00000506884.1]]
 
|DKFZP586D0823, NCRNA00206
 
|DKFZP586D0823, NCRNA00206
 
|prostate androgen-regulated transcript 1 (non-protein coding)
 
|prostate androgen-regulated transcript 1 (non-protein coding)
Line 2,792: Line 2,792:
 
|-
 
|-
 
|''PAUPAR''
 
|''PAUPAR''
−
|[[PAUPAR]]
+
|[[NONHSAT018635]]
 
|N/A
 
|N/A
 
|PAX6 upstream antisense RNA
 
|PAX6 upstream antisense RNA
Line 2,802: Line 2,802:
 
|-
 
|-
 
|''PCA3''
 
|''PCA3''
−
|[[PCA3]]
+
|[[ENST00000412654.1]]
 
|DD3, NCRNA00019, PCAT3
 
|DD3, NCRNA00019, PCAT3
 
|prostate cancer associated 3 (non-protein coding)
 
|prostate cancer associated 3 (non-protein coding)
 
|-
 
|-
 
|''PCAT1''
 
|''PCAT1''
−
|[[PCAT1]]
+
|[[ENST00000561978.1]]
 
|PCAT-1, PCA1
 
|PCAT-1, PCA1
 
|prostate cancer associated transcript 1 (non-protein coding)
 
|prostate cancer associated transcript 1 (non-protein coding)
Line 2,842: Line 2,842:
 
|-
 
|-
 
|''PCAT6''
 
|''PCAT6''
−
|[[ENST00000425295.1,ENST00000553157.1,ENST00000417262.1]]
+
|[[ENST00000425295.1]],[[ENST00000553157.1]],[[ENST00000417262.1]]
 
|N/A
 
|N/A
 
|Noncoding RNA activating2: ncRNA-a2, KDM5B antisense RNA 1 (KDM5B-AS1),, ENSG00000228288
 
|Noncoding RNA activating2: ncRNA-a2, KDM5B antisense RNA 1 (KDM5B-AS1),, ENSG00000228288
Line 2,917: Line 2,917:
 
|-
 
|-
 
|''PRNCR1''
 
|''PRNCR1''
−
|[[PRNCR1]]
+
|[[NONHSAT129019]]
 
|N/A
 
|N/A
 
|prostate cancer associated non-coding RNA 1
 
|prostate cancer associated non-coding RNA 1
Line 2,942: Line 2,942:
 
|-
 
|-
 
|''PTCSC2''
 
|''PTCSC2''
−
|[[PTCSC2]]
+
|[[ENST00000430058.1]]
 
|N/A
 
|N/A
 
|papillary thyroid carcinoma susceptibility candidate 2 (non-protein coding)
 
|papillary thyroid carcinoma susceptibility candidate 2 (non-protein coding)
 
|-
 
|-
 
|''PTCSC3''
 
|''PTCSC3''
−
|[[PTCSC3]]
+
|[[ENST00000556013.2]]
 
|N/A
 
|N/A
 
|papillary thyroid carcinoma susceptibility candidate 3 (non-protein coding)
 
|papillary thyroid carcinoma susceptibility candidate 3 (non-protein coding)
Line 2,967: Line 2,967:
 
|-
 
|-
 
|''PVT1''
 
|''PVT1''
−
|[[PVT1]]
+
|[[ENST00000513868.2]]
 
|NCRNA00079, LINC00079, onco-lncRNA-100
 
|NCRNA00079, LINC00079, onco-lncRNA-100
 
|Pvt1 oncogene (non-protein coding)
 
|Pvt1 oncogene (non-protein coding)
Line 2,992: Line 2,992:
 
|-
 
|-
 
|''PWRN1''
 
|''PWRN1''
−
|[[PWRN1]]
+
|[[NONHSAT040920]]
 
|NCRNA00198
 
|NCRNA00198
 
|Prader-Willi region non-protein coding RNA 1
 
|Prader-Willi region non-protein coding RNA 1
 
|-
 
|-
 
|''PWRN2''
 
|''PWRN2''
−
|[[PWRN2]]
+
|[[NONHSAT040875]]
 
|NCRNA00199
 
|NCRNA00199
 
|Prader-Willi region non-protein coding RNA 2
 
|Prader-Willi region non-protein coding RNA 2
Line 3,097: Line 3,097:
 
|-
 
|-
 
|''SCHLAP1''
 
|''SCHLAP1''
−
|[[SCHLAP1]]
+
|[[NONHSAT075852]]
 
|SWI/SNF complex antagonist associated with prostate cancer 1 (non-protein coding)
 
|SWI/SNF complex antagonist associated with prostate cancer 1 (non-protein coding)
 
|SChLAP1,PCAT11
 
|SChLAP1,PCAT11
Line 3,107: Line 3,107:
 
|-
 
|-
 
|''SENCR''
 
|''SENCR''
−
|[[SENCR]]
+
|[[ENST00000526269.2]]
 
|smooth muscle and endothelial cell enriched migration/differentiation-associated long non-coding RNA
 
|smooth muscle and endothelial cell enriched migration/differentiation-associated long non-coding RNA
 
|N/A
 
|N/A
Line 3,157: Line 3,157:
 
|-
 
|-
 
|''snaR''
 
|''snaR''
−
|[[lnc-BSPH1-1:1,lnc-BSPH1-2:1]]
+
|[[lnc-BSPH1-1:1]],[[lnc-BSPH1-2:1]]
 
|small NF90-associated RNAs
 
|small NF90-associated RNAs
 
|small NF90-associated RNAs
 
|small NF90-associated RNAs
Line 3,192: Line 3,192:
 
|-
 
|-
 
|''SNHG16''
 
|''SNHG16''
−
|[[SNHG16]]
+
|[[NONHSAT056039]]
 
|ncRAN
 
|ncRAN
 
|small nucleolar RNA host gene 16
 
|small nucleolar RNA host gene 16
Line 3,272: Line 3,272:
 
|-
 
|-
 
|''ST7OT''
 
|''ST7OT''
−
|[[NONHSAT122926,NONHSAT122918,NONHSAT122914,NONHSAT122932]]
+
|[[NONHSAT122926]],[[NONHSAT122918]],[[NONHSAT122914]],[[NONHSAT122932]]
 
|ST7OT1, ST7OT2, ST7OT3, ST7OT4, ST7AS1, ST7AS2, ST7AS3, ST7AS4, ENSG00000214188
 
|ST7OT1, ST7OT2, ST7OT3, ST7OT4, ST7AS1, ST7AS2, ST7AS3, ST7AS4, ENSG00000214188
 
|N/A
 
|N/A
Line 3,292: Line 3,292:
 
|-
 
|-
 
|''TARID''
 
|''TARID''
−
|[[TARID]]
+
|[[ENST00000607033.1]]
 
|N/A
 
|N/A
 
|TCF21 antisense RNA inducing promoter demethylation
 
|TCF21 antisense RNA inducing promoter demethylation
Line 3,302: Line 3,302:
 
|-
 
|-
 
|''TDRG1''
 
|''TDRG1''
−
|[[TDRG1]]
+
|[[NONHSAT112472]]
 
|LINC00532, lincRNA-NRN/A024015
 
|LINC00532, lincRNA-NRN/A024015
 
|testis development related 1 (non-protein coding)
 
|testis development related 1 (non-protein coding)
Line 3,327: Line 3,327:
 
|-
 
|-
 
|''THRIL''
 
|''THRIL''
−
|[[THRIL]]
+
|[[Lnc-DHX37-1:1]]
 
|Linc1992, TCONSN/A00020260, BRI3BP-AS1
 
|Linc1992, TCONSN/A00020260, BRI3BP-AS1
 
|TNF and HNRNPL related immunoregulatory long non-coding RNA
 
|TNF and HNRNPL related immunoregulatory long non-coding RNA
 
|-
 
|-
 
|''TINCR''
 
|''TINCR''
−
|[[TINCR]]
+
|[[ENST00000448587.1]]
 
|FLJ90734, NCRNA00036, LINC00036, onco-lncRNA-16
 
|FLJ90734, NCRNA00036, LINC00036, onco-lncRNA-16
 
|tissue differentiation-inducing non-protein coding RNA
 
|tissue differentiation-inducing non-protein coding RNA
Line 3,342: Line 3,342:
 
|-
 
|-
 
|''TMEM161B-AS1''
 
|''TMEM161B-AS1''
−
|[[lnc-RASA1-3:23,lnc-RASA1-3:25]]
+
|[[lnc-RASA1-3:23]],[[lnc-RASA1-3:25]]
 
|AK082072,linc-POLR3G-8, ENSG00000247828
 
|AK082072,linc-POLR3G-8, ENSG00000247828
 
|TMEM161B antisense RNA 1
 
|TMEM161B antisense RNA 1
Line 3,492: Line 3,492:
 
|-
 
|-
 
|''WFDC21P''
 
|''WFDC21P''
−
|[[WFDC21P]]
+
|[[Lnc-HEATR6-1:4]]
 
|WAP four-disulfide core domain 21, pseudogene
 
|WAP four-disulfide core domain 21, pseudogene
 
|LOC645638, lnc-DC, LNCDC
 
|LOC645638, lnc-DC, LNCDC

Revision as of 05:52, 24 June 2016

Name Transcript ID Alias Description
FAM3D-AS1 FAM3D-AS1 lnc-KCTD6-3 FAM3D antisense RNA 1
SHANK2-AS3 SHANK2-AS3 N/A SHANK2 antisense RNA 3
21A NONHSAT128494 ncRNA 21A N/A
7SK NONHSAT113149 7-3 RNA, K-RNA, 7SK-RNA, 7SK snRNA, RN7SK, ENSG00000202198 RNA, 7SK small nuclear
7SL lnc-LRR1-1:1 7S RNA, SRP RNA, 4.5S SRP RNA, 4.5S RNA, RN7SL1 RNA, ENSG00000258486 RNA, 7SL, cytoplasmic 1
AATBC AATBC N/A apoptosis associated transcript in bladder cancer
ABALON ABALON INXS apoptotic BCL2L1-antisense long non-coding RNA
ABHD11-AS1 ABHD11-AS1 NCRNA00035 ABHD11 antisense RNA 1 (tail to tail)
ABHD15-AS1 ABHD15-AS1 linc-TP53I13, lnc-TP53I13 ABHD15 antisense RNA 1
ACTA2-AS1 ACTA2-AS1 uc001kfo.1, ZXF1 ACTA2 antisense RNA 1
ADAMTS9-AS2 ADAMTS9-AS2 N/A ADAMTS9 antisense RNA 2
ADORA2A-AS1 ADORA2A-AS1 FLJ34651 ADORA2A antisense RNA 1
AFAP1-AS1 AFAP1-AS1 MGC10981 AFAP1 antisense RNA 1
AGAP2-AS1 AGAP2-AS1 LOC100130776, PUNISHER AGAP2 antisense RNA 1
AIRN ENST00000609176.1 AIRN, AIRN, IGF2RAS Antisense of IGF2R non-protein coding RNA
Alpha 250/Alpha 280 NONHSAT104559,lnc-NDST1-1:2 N/A N/A
ANP32A-IT1 ANP32A-IT1 FLJ11722, HsT18971 ANP32A intronic transcript 1
APOA1-AS ENST00000444200.1 APOA1 antisense RNA N/A
APTR NONHSAT121673 Alu-mediated CDKN1A/p21 N/A
ARRDC1-AS1 ARRDC1-AS1 N/A ARRDC1 antisense RNA 1
ASAP1-IT1 ASAP1-IT1 HSPC054, NCRNA00050, ASAP1IT, ASAP1-IT ASAP1 intronic transcript 1
ASMTL-AS1 ASMTL-AS1 FLJ13330 ASMTL antisense RNA 1
ATP1A1-AS1 ATP1A1-AS1 MGC16179 ATP1A1 antisense RNA 1
ATXN8OS NONHSAT034251 NCRNA00003, non-protein coding RNA 3, ATXN8OS, KLHL1AS, SCA8, ENSG00000230223 Spinocerebellar ataxia 8 (SCA8) RNA;KLHL1AS: kelch-like 1 (Drosophila) antisense;ATXN8OS: ataxin 8 opposite strand
B3GALT5-AS1 B3GALT5-AS1 N/A B3GALT5 antisense RNA 1
B4GALT1-AS1 B4GALT1-AS1 N/A B4GALT1 antisense RNA 1
BAALC-AS2 BAALC-AS2 MGC39526 BAALC antisense RNA 2
BACE1-AS NONHSAT024403,lnc-RNF214-1:2 BACE1AS,NCRNA00177; FJ573250 BACE1 antisense RNA
BANCR BANCR LINC00586 BRAF-activated non-protein coding RNA
BCAR4 BCAR4 N/A breast cancer anti-estrogen resistance 4 (non-protein coding)
BCYRN1 lnc-EPCAM-1:2 BC200,BC200a, NCRNA00004, LINC00004 BCYRN1, brain cytoplasmic RNA 1
BDNF-AS BDNF-AS BDNF antisense RNA BT2A, BT2B,BT2C,BT2D,NCRNA00049,BDNF-AS1, NCRNA00049
Beta-globin transcripts NONHSAT017676,NONHSAT017675,NONHSAT017674 N/A N/A
BFSP2-AS1 BFSP2-AS1 MGC2848 BFSP2 antisense RNA 1
BGLT3 BGLT3 LINC01083, BGL3, lncRNA-BGL3 beta globin locus transcript 3 (non-protein coding)
BIN3-IT1 BIN3-IT1 FLJ14107 BIN3 intronic transcript 1
BIRC6-AS1 BIRC6-AS1 N/A BIRC6 antisense RNA 1
BIRC6-AS2 BIRC6-AS2 megamind BIRC6 antisense RNA 2
BISPR BISPR N/A BST2 interferon stimulated positive regulator (non-protein coding)
BLACAT1 BLACAT1 linc-UBC1,LINC00912, onco-lncRNA-30 bladder cancer associated transcript 1 (non-protein coding)
BOK-AS1 BOK-AS1 NCRNA00151, NAToB BOK antisense RNA 1
BPESC1 ENST00000418282.1 NCRNA00187 blepharophimosis, epicanthus inversus and ptosis, candidate 1 (non-protein coding)
BRWD1-AS2 BRWD1-AS2 N/A BRWD1 antisense RNA 2
C1QTNF9B-AS1 C1QTNF9B-AS1 PCOTH C1QTNF9B antisense RNA 1
C21orf91-OT1 C21orf91-OT1 D21S2089E C21orf91 overlapping transcript 1
C5orf66-AS1 C5orf66-AS1 CTC-276P9.1, Epist C5orf66 antisense RNA 1
C5orf66-AS2 C5orf66-AS2 N/A C5orf66 antisense RNA 2
C8orf34-AS1 C8orf34-AS1 N/A C8orf34 antisense RNA 1
CACNA1G-AS1 CACNA1G-AS1 N/A CACNA1G antisense RNA 1
CAHM ENST00000604200.1 LINC00468 colon adenocarcinoma hypermethylated (non-protein coding)
CAPN10-AS1 CAPN10-AS1 locus959 CAPN10 antisense RNA 1 (head to head)
CAR Intergenic 10 NONHSAT016928,lnc-FANK1-3:1 Intergenic10, CR611911, AK055628 Chromatin Associated RNA 10
CARD8-AS1 CARD8-AS1 LOC100505812 CARD8 antisense RNA 1
CARMN CARMN CARMEN cardiac mesoderm enhancer-associated non-coding RNA
CASC11 CASC11 TCONSN/A00014535, LINC00990, CARLo-7 cancer susceptibility candidate 11 (non-protein coding)
CASC15 CASC15 N/A cancer susceptibility candidate 15 (non-protein coding)
CASC19 CASC19 CARLo-6 cancer susceptibility candidate 19 (non-protein coding)
CASC2 CASC2 N/A cancer susceptibility candidate 2 (non-protein coding)
CASC21 CASC21 CARLo-2 cancer susceptibility candidate 21 (non-protein coding)
CASC22 CASC22 TCONSN/A00024290, LincRNA-ENST00000515084 cancer susceptibility candidate 22 (non-protein coding)
CASC8 CASC8 LINC00860,CARLo-1 cancer susceptibility candidate 8 (non-protein coding)
CASC9 CASC9 LINC00981, ESCCAL-1 cancer susceptibility candidate 9 (non-protein coding)
CBR3-AS1 CBR3-AS1 PlncRNA-1 CBR3 antisense RNA 1
CCAT1 NONHSAT129017 CARLo-5, onco-lncRNA-40 colon cancer associated transcript 1 (non-protein coding)
CCAT2 CCAT2 NCCP1, LINC00873 colon cancer associated transcript 2 (non-protein coding)
CCDC18-AS1 CCDC18-AS1 ENST00000440778.1 CCDC18 antisense RNA 1
CCDC26 CCDC26 MGC27434, RAM CCDC26 long non-coding RNA
CCEPR CCEPR CCHE1 cervical carcinoma expressed PCNA regulatory lncRNA
CDKN1A-AS1 CDKN1A-AS1 p21NAT CDKN1A antisense RNA 1
CDKN2B-AS1 NONHSAT130421,lnc-C9orf53-2:1 ANRIL, p15AS, ENSG00000240498 CDKN2B antisense RNA 1
CDR1-AS CDR1-AS CDR1NAT, ciRS-7, CDR1as CDR1 antisense RNA
CDRT7 CDRT7 NCRNA00025, LINC00025 CMT1A duplicated region transcript 7 (non-protein coding)
CDRT8 CDRT8 N/A CMT1A duplicated region transcript 8
CECR3 CECR3 N/A cat eye syndrome chromosome region, candidate 3 (non-protein coding)
CECR5-AS1 CECR5-AS1 NCRNA00017 CECR5 antisense RNA 1
CECR7 CECR7 SAHL1 cat eye syndrome chromosome region, candidate 7 (non-protein coding)
CECR9 CECR9 N/A cat eye syndrome chromosome region, candidate 9 (non-protein coding)
CEP83-AS1 CEP83-AS1 N/A CEP83 antisense RNA 1 (head to head)
CIRBP-AS1 CIRBP-AS1 MGC39338 CIRBP antisense RNA 1
CISTR NONHSAT028496 CISTR-ACT, CISTRACT, re52431 chondrogenesis-associated transcript
CLRN1-AS1 CLRN1-AS1 UCRP CLRN1 antisense RNA 1
COPG2IT1 COPG2IT1 CIT1, NCRNA00170, COPG2AS COPG2 imprinted transcript 1 (non-protein coding)
CPS1-IT1 CPS1-IT1 PRO0132, CPS1-IT CPS1 intronic transcript 1
CRNDE Lnc-IRX3-4:2 LOC643911, LINC00180, CRNDEP colorectal neoplasia differentially expressed (non-protein coding)
CSNK1G2-AS1 CSNK1G2-AS1 MGC39696 CSNK1G2 antisense RNA 1
CSTF3-AS1 CSTF3-AS1 N/A CSTF3 antisense RNA 1 (head to head)
CTBP1-AS CTBP1-AS PCAT10 CTBP1 antisense RNA
CTBP1-AS2 CTBP1-AS2 MGC21675 CTBP1 antisense RNA 2 (head to head)
CYP1B1-AS1 CYP1B1-AS1 MGC34824 CYP1B1 antisense RNA 1
CYP4A22-AS1 ENST00000444042.2 Noncoding RNA activating3: ncRNA-a3, ENST00000444042.2, ENSG00000225506 CYP4A22 antisense RNA 1
CYP51A1-AS1 CYP51A1-AS1 ENST00000453068, LRRD1-AS1 CYP51A1 antisense RNA 1
CYYR1-AS1 ENST00000357401.3 cysteine and tyrosine rich 1 antisense RNA 1 N/A
DACOR1 DACOR1 TCONSN/A00023265 DNMT1-associated colon cancer repressed lncRNA 1
DALIR DALIR DALI DNMT1-associated long intergenic non-coding RNA
DANCR DANCR differentiation antagonizing non-protein coding RNA ANCR, AGU2, lncRNA-ANCR
DANT1 DANT1 N/A DXZ4 associated non-coding transcript 1, proximal
DANT2 DANT2 N/A DXZ4 associated non-coding transcript 2, distal
DAOA-AS1 DAOA-AS1 G30 DAOA antisense RNA 1
DAPK1-IT1 DAPK1-IT1 N/A DAPK1 intronic transcript 1
DBET NONHSAT099821 DBE-T, DUX4L30 D4Z4 binding element transcript (non-protein coding)
DBH-AS1 DBH-AS1 BPR DBH antisense RNA 1
DGCR10 DGCR10 DGS-B DiGeorge syndrome critical region gene 10 (non-protein coding)
DGCR11 DGCR11 DGS-D DiGeorge syndrome critical region gene 11 (non-protein coding)
DGCR12 DGCR12 DGS-E DiGeorge syndrome critical region gene 12 (non-protein coding)
DGCR5 DGCR5 NCRNA00037, LINC00037 DiGeorge syndrome critical region gene 5 (non-protein coding)
DGCR9 DGCR9 DGS-A, POM121L5P DiGeorge syndrome critical region gene 9 (non-protein coding)
DHFR upstream transcripts NONHSAT102417 DHFR minor transcript 5'-UTR, ENSG00000228716 N/A
DHRS4-AS1 NONHSAT035954 DHRS4 antisense RNA 1 PRO1488,AS1DHRS4
DIAPH2-AS1 DIAPH2-AS1 N/A DIAPH2 antisense RNA 1
DIO3OS NONHSAT040032,NONHSAT040039 DIO3-AS1, NCRNA00041, non-protein coding RNA 41, ENSG00000258498 DIO3 opposite strand/antisense RNA (head to head)
DISC1FP1 DISC1FP1 N/A DISC1 fusion partner 1 (non-protein coding)
DISC2 NONHSAT010191 DISC1-AS1, DISC1OS, NCRNA00015 disrupted in schizophrenia 2 (non-protein coding)
DLEU1 NONHSAT033797 deleted in lymphocytic leukemia 1 (non-protein coding) LEU1, XTP6, NCRNA00021, LINC00021, BCMS1
DLEU2 NONHSAT033821 deleted in lymphocytic leukemia 2 (non-protein coding) LEU2, TRIM13OS, NCRNA00022, LINC00022, MIR15AHG
DLG2-AS1 DLG2-AS1 PSZA11q14, SZ-1 DLG2 antisense RNA 1
DLGAP1-AS3 DLGAP1-AS3 N/A DLGAP1 antisense RNA 3
DLX6-AS1 DLX6-AS1 FLJ34048, Evf-2 DLX6 antisense RNA 1
DNM3OS DNM3OS MIR199A2HG, DNM3-AS1 DNM3 opposite strand/antisense RNA
DRAIC DRAIC N/A downregulated RNA in cancer, inhibitor of cell invasion and migration
DSCR10 DSCR10 N/A Down syndrome critical region 10 (non-protein coding)
DSCR9 DSCR9 NCRNA00038 Down syndrome critical region 9 (non-protein coding)
DUBR DUBR N/A DPPA2 upstream binding RNA
EGFR-AS1 EGFR-AS1 N/A EGFR antisense RNA 1
EGOT NONHSAT087635 EGO, eosinophil granule ontogeny, NCRNA00190, non-protein coding RNA 190, ENSG00000235947 Eosinophil granule ontogeny (EGO) RNA
ELFN1-AS1 ELFN1-AS1 N/A ELFN1 antisense RNA 1
EMX2OS lnc-PDZD8-3:1 EMX2-AS1, NCRNA00045, non-protein coding RNA 45,ENSG00000229847 Emx2 opposite strand transcript.
ENTPD3-AS1 ENTPD3-AS1 FLJ36665 ENTPD3 antisense RNA 1
EPB41L4A-AS1 EPB41L4A-AS1 TIGA1 EPB41L4A antisense RNA 1
EPB41L4A-AS2 EPB41L4A-AS2 FLJ11235 EPB41L4A antisense RNA 2 (head to head)
ERC2-IT1 ERC2-IT1 Po42 ERC2 intronic transcript 1
ERICD Lnc-CHRAC1-2:1 TCONS_00014875, ERIC E2F1-regulated inhibitor of cell death (non-protein coding)
ERICH1-AS1 ERICH1-AS1 N/A ERICH1 antisense RNA 1
ESRG ENST00000583516.1 HESRG embryonic stem cell related (non-protein coding)
Evf2 lnc-DLX5-3:1 Evf-2, Dlx6as1, Dlx6os1, ENSG00000231764 N/A
EWSAT1 EWSAT1 FLJ33768 Ewing sarcoma associated transcript 1
EXOC3-AS1 EXOC3-AS1 N/A EXOC3 antisense RNA 1
EXTL3-AS1 EXTL3-AS1 N/A EXTL3 antisense RNA 1
F11-AS1 F11-AS1 N/A F11 antisense RNA 1
FALEC ENST00000416894.1 LINC00568, long intergenic non-protein coding RNA 568, ENSG00000228126.1 focally amplified long non-coding RNA in epithelial cancer
FAM138A FAM138A F379 family with sequence similarity 138 member A
FAM138B FAM138B F379 family with sequence similarity 138 member B
FAM138C FAM138C F379 family with sequence similarity 138 member C
FAM138D FAM138D F379 family with sequence similarity 138 member D
FAM138E FAM138E F379 family with sequence similarity 138 member E
FAM138F FAM138F F379 family with sequence similarity 138 member F
FAM13A-AS1 FAM13A-AS1 NCRNA00039 FAM13A antisense RNA 1
FAM201A FAM201A N/A family with sequence similarity 201 member A
FAM215A FAM215A APR-2, LINC00530 family with sequence similarity 215 member A (non-protein coding)
FAM222A-AS1 FAM222A-AS1 N/A FAM222A antisense RNA 1
FAM226A FAM226A MGC34827 family with sequence similarity 226 member A (non-protein coding)
FAM226B FAM226B N/A family with sequence similarity 226 member B (non-protein coding)
FAM27E3 FAM27E3 MGC42630 family with sequence similarity 27 member E3
FAM41AY1 FAM41AY1 N/A family with sequence similarity 41 member A, Y-linked 1
FAM41C FAM41C N/A family with sequence similarity 41 member C
FAM66C FAM66C N/A family with sequence similarity 66 member C
FAM74A3 FAM74A3 OTTHUMG00000067149 family with sequence similarity 74 member A3
FAM83H-AS1 FAM83H-AS1 onco-lncRNA-3 FAM83H antisense RNA 1 (head to head)
FAM87A FAM87A N/A family with sequence similarity 87 member A
FAS-AS NONHSAT015489 SAF, ENSG00000026103 FAS antisense RNA 1
FAS-AS1 FAS-AS1 SAF FAS antisense RNA 1
FENDRR FENDRR FOXF1 adjacent non-coding developmental regulatory RNA lincFOXF1, onco-lncRNA-21
FGF10-AS1 FGF10-AS1 RP11-473L15.2 FGF10 antisense RNA 1
FIRRE ENST00000427391.1 firre intergenic repeating RNA element LINC01200
FLG-AS1 FLG-AS1 N/A FLG antisense RNA 1
FLVCR1-AS1 FLVCR1-AS1 LQK1 FLVCR1 antisense RNA 1 (head to head)
FMR1-AS1 FMR1-AS1 ASFMR1, FMR4 FMR1 antisense RNA 1
FOXC2-AS1 FOXC2-AS1 ODRUL FOXC2 antisense RNA 1
FOXCUT Lnc-FOXC1-1:1,NONHSAT106529 TCONS_00011636 FOXC1 upstream transcript (non-protein coding)
FOXG1-AS1 FOXG1-AS1 FOXG1-AS FOXG1 antisense RNA 1 (head to head)
FRGCA FRGCA LncRNA-AP001631.9 FOXM1-regulated, gastric cancer associated
FTX ENST00000602812.1 LINC00182,FLJ33139 FTX transcript, XIST regulator (non-protein coding)
GABPB1-AS1 GABPB1-AS1 N/A GABPB1 antisense RNA 1
GACAT1 ENST00000441383.1 LINC00876, AC096655.1-002 gastric cancer associated transcript 1 (non-protein coding)
GACAT2 ENST00000579368.1 HMlincRNA717 gastric cancer associated transcript 2 (non-protein coding)
GACAT3 ENST00000426539.1 lncRNA-AC130710 gastric cancer associated transcript 3 (non-protein coding)
GAPLINC GAPLINC TCONSN/A00026238 gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA
GAS1RR GAS1RR LncRNA-Hh GAS1 adjacent regulatory RNA
GAS5 NONHSAT007663 SNHG2, ENSG00000234741 N/A
GAS6-AS1 GAS6-AS1 N/A GAS6 antisense RNA 1
GAS8-AS1 GAS8-AS1 N/A GAS8 antisense RNA 1
GATA3-AS1 GATA3-AS1 N/A GATA3 antisense RNA 1
GATA6-AS1 GATA6-AS1 locus5689 GATA6 antisense RNA 1 (head to head)
GDNF-AS1 GDNF-AS1 GDNFOS GDNF antisense RNA 1 (head to head)
GHET1 GHET1 lncRNA-GHET1 gastric carcinoma proliferation enhancing transcript 1
GHRLOS NONHSAT087920 NCRNA00068,GHRL-AS1 ghrelin opposite strand/antisense RNA
GLIDR GLIDR MGC21881, TCONSN/A00015562 glioblastoma down-regulated RNA
GLIS3-AS1 GLIS3-AS1 MGC16153 GLIS3 antisense RNA 1
GNAS-AS1 lnc-CTSZ-5:1 GNAS antisense, GNAS1AS, NCRNA00075, NESP-AS, NESPAS, non-protein coding RNA 75, SANG, ENSG00000235590 neuroendocrine secretory protein (Nesp) antisense.
GNG12-AS1 GNG12-AS1 N/A GNG12 antisense RNA 1
GPR1-AS NONHSAT076558 GPR1AS GPR1 antisense RNA
GTSCR1 GTSCR1 N/A Gilles de la Tourette syndrome chromosome region, candidate 1 (non-protein coding)
H19 NONHSAT017465 Q96MK8,ENSG00000130600 H19, imprinted maternally expressed transcript (non-protein coding)
H1FX-AS1 H1FX-AS1 FLJ34151 H1FX antisense RNA 1
HAGLR ENST00000416928.2,NONHSAT075638 Mdgt HOXD antisense growth-associated long non-coding RNA
HAND2-AS1 HAND2-AS1 DEIN, NBLA00301, FLJ11539 HAND2 antisense RNA 1 (head to head)
HAR1A lnc-BIRC7-2:1 HAR1F, ENSG00000238820 highly accelerated region 1A
HAR1B ENST00000447910.2 HAR1R, ENSG00000231133 highly accelerated region 1B
HAS2-AS1 HAS2-AS1 HASNT, NCRNA00077 HAS2 antisense RNA 1
HCCAT5 HCCAT5 HTA, FJ222407 hepatocellular carcinoma associated transcript 5 (non-protein coding)
HCG27 HCG27 bPG299F13.9, bCX101P6.9, bQB115I13.2, FLJ40123 HLA complex group 27 (non-protein coding)
HCG4 HCG4 HCGIV-10, HCGIV.9 HLA complex group 4 (non-protein coding)
HCG4B HCG4B HCGIV-6, HCGIV.5, HCGIV-06, bCX67J3.3, Em:AB023056.16, bPG309N1.1, bQB90C11.3 HLA complex group 4B (non-protein coding)
HCG9 HCG9 PERB11, HCGIX, HCGIX4, HCGIX-4 HLA complex group 9 (non-protein coding)
HCP5 HCP5 D6S2650E, P5-1 HLA complex P5 (non-protein coding)
HEIH HEIH LINC-HEIH, lncRNA-HEIH, LINC00848, HCCAT2 hepatocellular carcinoma up-regulated EZH2-associated long non-coding RNA
HELLPAR HELLPAR LINC-HELLP HELLP associated long non-coding RNA
HEXA-AS1 HEXA-AS1 FLJ13315 HEXA antisense RNA 1
HIF1A-AS1 HIF1A-AS1 5'aHIF-1A HIF1A antisense RNA 1
HIF1A-AS2 HIF1A-AS2 3'aHIF-1A, aHIF HIF1A antisense RNA 2
HNF1A-AS1 HNF1A-AS1 FLJ38690 HNF1A antisense RNA 1
HNF4A-AS1 HNF4A-AS1 uc002xlx HNF4A antisense RNA 1
HORMAD2-AS1 HORMAD2-AS1 MTMR3-AS1, NONHSAG033653 HORMAD2 antisense RNA 1
HOTAIR NONHSAT028508 Gm16258, Hox antisense intergenic RNA, ENSG00000228630 Hox antisense intergenic RNA
HOTAIRM1 lnc-EVX1-12:1 HIT06113, HIT92376, linc1548, ENSG00000233429 HOXA transcript antisense RNA, myeloid-specific 1
HOTTIP NONHSAT119717 HOXA13as, HIT18844, NCRNA00213, ENSG00000243766 HOXA transcript at the distal tip
HOXA11-AS NONHSAT119704 HOXA cluster antisense RNA 5 (non-protein coding), HOXA-AS5, HOXA11 antisense RNA 1 (non-protein coding), HOXA11-AS1, HOXA11S, NCRNA00076, non-protein coding RNA 76, ENSG00000240990 HOXA11 antisense RNA
HOXA-AS2 NONHSAT119676 HOXA3as, ENSG00000253552 HOXA cluster antisense RNA 2
HOXA-AS3 lnc-EVX1-9:1 HOXA6as HOXA cluster antisense RNA 3
HPVC1 HPVC1 PE5L, HPV18E5L human papillomavirus (type 18) E5 central sequence-like 1
HTT-AS HTT-AS HTTAS HTT antisense RNA (head to head)
HULC NONHSAT107640 ENSG00000251164 hepatocellular carcinoma up-regulated long non-coding RNA
HYMAI HYMAI NCRNA00020 hydatidiform mole associated and imprinted (non-protein coding)
IDI2-AS1 IDI2-AS1 HT009, Em:AC022536.4 IDI2 antisense RNA 1
IFNG-AS1 ENST00000538665.1 LincR-Ifng-3'AS, NEST, Theiler's murine encephalomyelitis virus persistence candidate gene 1, Tmevpg1, ENSG00000255733 IFNG antisense RNA 1
IGF2-AS IGF2-AS PEG8, IGF2-AS1 IGF2 antisense RNA
ILF3-AS1 ILF3-AS1 N/A ILF3 antisense RNA 1 (head to head)
INE1 INE1 NCRNA00010 inactivation escape 1 (non-protein coding)
INE2 INE2 NCRNA00011 inactivation escape 2 (non-protein coding)
IPW NONHSAT041063 NCRNA00002 imprinted in Prader-Willi syndrome
IRAIN IRAIN IGF1R-AS IGF1R antisense imprinted non-protein coding RNA
JADRR JADRR lncRNA-JADE JADE1 adjacent regulatory RNA
JMJD1C-AS1 JMJD1C-AS1 N/A JMJD1C antisense RNA 1
JPX lnc-ZCCHC13-1:1 DCBALD06, ENOX, expressed neighbor of XIST, just proximal to XIST, LINC00183 JPX transcript, XIST activator (non-protein coding)
KANTR ENST00000604849.1 KDM5C adjacent non-coding transcript Spasm
KCNIP4-IT1 NONHSAT095745 non coding transcript UM9(5), UM9-5 KCNIP4 intronic transcript 1 (non-protein coding)
KCNK15-AS1 KCNK15-AS1 RP11-445H22.4 KCNK15 antisense RNA 1 (head to head)
KCNMB2-AS1 KCNMB2-AS1 RP11-385J1.2 KCNMB2 antisense RNA 1
KCNQ1DN KCNQ1DN BWRT, HSA404617 KCNQ1 downstream neighbor (non-protein coding)
KCNQ1OT1 NONHSAT017524 KCNQ1 antisense RNA 2 (non-protein coding), KCNQ1 overlapping transcript 1 (non-protein coding), KCNQ1-AS2, KvDMR1, KvLQT1-AS, LIT1, NCRNA00012, non-protein coding RNA 12 KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)
KIAA1614-AS1 KIAA1614-AS1 RP11-46A10.4 KIAA1614 antisense RNA 1
KIF25-AS1 KIF25-AS1 HGC6.1.1 KIF25 antisense RNA 1
KRASP1 NONHSAT113225 ENSG00000220635 KRAS Pseudogene 1
LAMP5-AS1 LAMP5-AS1 N/A LAMP5 antisense RNA 1
LBX2-AS1 LBX2-AS1 N/A LBX2 antisense RNA 1
LCAL1 LCAL1 onco-lncRNA-27 lung cancer associated lncRNA 1
LHX5-AS1 LHX5-AS1 locus4010 LHX5 antisense RNA 1 (head to head)
LIFR-AS1 LIFR-AS1 N/A LIFR antisense RNA 1
LINC00029 LINC00029 bA305P22.4 long intergenic non-protein coding RNA 29
LINC00052 LINC00052 FLJ31461 long intergenic non-protein coding RNA 52
LINC00094 LINC00094 FLJ35348, bA374P20.3 long intergenic non-protein coding RNA 94
LINC00114 LINC00114 N/A long intergenic non-protein coding RNA 114
LINC00115 LINC00115 FLJ22639 long intergenic non-protein coding RNA 115
LINC00152 LINC00152 MGC4677 long intergenic non-protein coding RNA 152
LINC00160 LINC00160 N/A long intergenic non-protein coding RNA 160
LINC00161 LINC00161 N/A long intergenic non-protein coding RNA 161
LINC00163 LINC00163 NLC1-A, NLC1A long intergenic non-protein coding RNA 163
LINC00165 LINC00165 NLC1-B long intergenic non-protein coding RNA 165
LINC00189 LINC00189 N/A long intergenic non-protein coding RNA 189
LINC00205 LINC00205 N/A long intergenic non-protein coding RNA 205
LINC00235 LINC00235 N/A long intergenic non-protein coding RNA 235
LINC00237 LINC00237 N/A long intergenic non-protein coding RNA 237
LINC00244 LINC00244 N/A long intergenic non-protein coding RNA 244
LINC00261 LINC00261 bA216C10.1, HCCDR1, TCONSN/A00027846, ALIEN, DEANR1, onco-lncRNA-17 long intergenic non-protein coding RNA 261
LINC00265 LINC00265 NCRNA00265-1 long intergenic non-protein coding RNA 265
LINC00272 LINC00272 RP1-223H12.3 long intergenic non-protein coding RNA 272
LINC00293 LINC00293 BEYLA long intergenic non-protein coding RNA 293
LINC00294 LINC00294 N/A long intergenic non-protein coding RNA 294
LINC00299 LINC00299 FLJ45673 long intergenic non-protein coding RNA 299
LINC00301 LINC00301 MGC39681 long intergenic non-protein coding RNA 301
LINC00302 LINC00302 XP33 long intergenic non-protein coding RNA 302
LINC00305 LINC00305 MGC39571, HsT1235 long intergenic non-protein coding RNA 305
LINC00307 LINC00307 D21S2091E long intergenic non-protein coding RNA 307
LINC00308 LINC00308 PRED16 long intergenic non-protein coding RNA 308
LINC00310 LINC00310 N/A long intergenic non-protein coding RNA 310
LINC00311 LINC00311 MGC22001 long intergenic non-protein coding RNA 311
LINC00312 NONHSAT087716 NAG7, NAG-7, ERR10, LMCD1DN, ERR-10 long intergenic non-protein coding RNA 312
LINC00313 LINC00313 N/A long intergenic non-protein coding RNA 313
LINC00314 LINC00314 N/A long intergenic non-protein coding RNA 314
LINC00315 LINC00315 N/A long intergenic non-protein coding RNA 315
LINC00320 LINC00320 PRED14, FLJ37539 long intergenic non-protein coding RNA 320
LINC00322 LINC00322 FLJ16545 long intergenic non-protein coding RNA 322
LINC00323 LINC00323 PRED42, FLJ37173 long intergenic non-protein coding RNA 323
LINC00324 LINC00324 FLJ34790, MGC104931 long intergenic non-protein coding RNA 324
LINC00334 LINC00334 N/A long intergenic non-protein coding RNA 334
LINC00337 LINC00337 MGC40168 long intergenic non-protein coding RNA 337
LINC00339 LINC00339 HSPC157 long intergenic non-protein coding RNA 339
LINC00342 LINC00342 N/A long intergenic non-protein coding RNA 342
LINC00346 LINC00346 N/A long intergenic non-protein coding RNA 346
LINC00347 LINC00347 N/A long intergenic non-protein coding RNA 347
LINC00426 LINC00426 N/A long intergenic non-protein coding RNA 426
LINC00441 LINC00441 ncRNA-RB1 long intergenic non-protein coding RNA 441
LINC00461 LINC00461 EyeLinc1, Visc-1a, Visc-1b, Visc-2, LOC645323 long intergenic non-protein coding RNA 461
LINC00466 LINC00466 N/A long intergenic non-protein coding RNA 466
LINC00467 LINC00467 MGC14801 long intergenic non-protein coding RNA 467
LINC00470 LINC00470 N/A long intergenic non-protein coding RNA 470
LINC00471 LINC00471 MGC43122 long intergenic non-protein coding RNA 471
LINC00472 LINC00472 dJ288M22.3, FLJ13189 long intergenic non-protein coding RNA 472
LINC00473 LINC00473 bA142J11.1 long intergenic non-protein coding RNA 473
LINC00477 LINC00477 FLJ32894, FAM191B long intergenic non-protein coding RNA 477
LINC00491 LINC00491 BC008363 long intergenic non-protein coding RNA 491
LINC00493 LINC00493 LOC388789 long intergenic non-protein coding RNA 493
LINC00494 LINC00494 N/A long intergenic non-protein coding RNA 494
LINC00507 LINC00507 N/A long intergenic non-protein coding RNA 507
LINC00511 LINC00511 onco-lncRNA-12 long intergenic non-protein coding RNA 511
LINC00518 LINC00518 MGC40222 long intergenic non-protein coding RNA 518
LINC00526 LINC00526 MGC17515, HsT959 long intergenic non-protein coding RNA 526
LINC00528 LINC00528 FLJ40542 long intergenic non-protein coding RNA 528
LINC00529 LINC00529 N/A long intergenic non-protein coding RNA 529
LINC00536 LINC00536 N/A long intergenic non-protein coding RNA 536
LINC00538 LINC00538 Yiya, PROX1UT long intergenic non-protein coding RNA 538
LINC00570 ENST00000437795.1,ENST00000432665.1,ENST00000453100.1,ENST00000417473.2 KDM5BAS1, ncRNA-a2, onco-lncRNA-96, PCAN-R1, prostate cancer-associated noncoding RNA 1,ENSG00000224177, prostate cancer associated transcript 6 (non-protein coding)
LINC00575 LINC00575 N/A long intergenic non-protein coding RNA 575
LINC00581 lnc-PRL-6:2,lnc-PRL-6:1 BX118339,Hs.112750, linc-MBOAT1-4: TCONS_00012107, linc-MBOAT1-4: TCONS_00012678 long intergenic non-protein coding RNA 581
LINC00588 LINC00588 DKFZP434F122 long intergenic non-protein coding RNA 588
LINC00593 LINC00593 MGC42951 long intergenic non-protein coding RNA 593
LINC00598 LINC00598 TTL long intergenic non-protein coding RNA 598
LINC00599 lnc-TNKS-1:1 retinal non-coding RNA 3, Rncr3, ENSG00000253230 Retinal noncoding RNA 3, long intergenic non-protein coding RNA 599
LINC00608 LINC00608 N/A long intergenic non-protein coding RNA 608
LINC00612 LINC00612 MGC40170, FLJ41814 long intergenic non-protein coding RNA 612
LINC00620 LINC00620 N/A long intergenic non-protein coding RNA 620
LINC00623 LINC00623 N/A long intergenic non-protein coding RNA 623
LINC00628 LINC00628 N/A long intergenic non-protein coding RNA 628
LINC00632 LINC00632 N/A long intergenic non-protein coding RNA 632
LINC00634 LINC00634 N/A long intergenic non-protein coding RNA 634
LINC00635 LINC00635 N/A long intergenic non-protein coding RNA 635
LINC00636 LINC00636 N/A long intergenic non-protein coding RNA 636
LINC00638 LINC00638 MGC23270 long intergenic non-protein coding RNA 638
LINC00649 LINC00649 TCONSN/A00028768 long intergenic non-protein coding RNA 649
LINC00652 LINC00652 HSPC072 long intergenic non-protein coding RNA 652
LINC00661 LINC00661 N/A long intergenic non-protein coding RNA 661
LINC00662 LINC00662 N/A long intergenic non-protein coding RNA 662
LINC00663 LINC00663 MGC39821 long intergenic non-protein coding RNA 663
LINC00667 LINC00667 N/A long intergenic non-protein coding RNA 667
LINC00668 LINC00668 N/A long intergenic non-protein coding RNA 668
LINC00673 LINC00673 HI-LNC75 long intergenic non-protein coding RNA 673
LINC00675 LINC00675 N/A long intergenic non-protein coding RNA 675
LINC00682 LINC00682 N/A long intergenic non-protein coding RNA 682
LINC00685 LINC00685 OTTHUMT00000055574 long intergenic non-protein coding RNA 685
LINC00689 LINC00689 N/A long intergenic non-protein coding RNA 689
LINC00692 LINC00692 N/A long intergenic non-protein coding RNA 692
LINC00704 LINC00704 N/A long intergenic non-protein coding RNA 704
LINC00705 LINC00705 N/A long intergenic non-protein coding RNA 705
LINC00839 LINC00839 N/A long intergenic non-protein coding RNA 839
LINC00850 LINC00850 KUCG1 long intergenic non-protein coding RNA 850
LINC00852 LINC00852 NAG73, GHRL-AS2 long intergenic non-protein coding RNA 852
LINC00853 ENST00000429328.2 PDZK1IP1 antisense RNA 1 (non-protein coding), PDZK1IP1 antisense RNA 1 (tail to tail), PDZK1IP1-AS1 ,ENSG00000224805 long intergenic non-protein coding RNA 853
LINC00854 LINC00854 N/A long intergenic non-protein coding RNA 854
LINC00857 LINC00857 N/A long intergenic non-protein coding RNA 857
LINC00868 LINC00868 N/A long intergenic non-protein coding RNA 868
LINC00869 LINC00869 KIAA0493 long intergenic non-protein coding RNA 869
LINC00880 LINC00880 N/A long intergenic non-protein coding RNA 880
LINC00882 LINC00882 N/A long intergenic non-protein coding RNA 882
LINC00887 LINC00887 linc-ATP13A4-8 long intergenic non-protein coding RNA 887
LINC00893 LINC00893 N/A long intergenic non-protein coding RNA 893
LINC00901 LINC00901 TCONSN/A00005428, BC040587 long intergenic non-protein coding RNA 901
LINC00917 LINC00917 N/A long intergenic non-protein coding RNA 917
LINC00936 LINC00936 N/A long intergenic non-protein coding RNA 936
LINC00942 LINC00942 N/A long intergenic non-protein coding RNA 942
LINC00950 LINC00950 FP588 long intergenic non-protein coding RNA 950
LINC00951 LINC00951 lincRNA-uc003opf.1, FLJ41649 long intergenic non-protein coding RNA 951
LINC00961 LINC00961 N/A long intergenic non-protein coding RNA 961
LINC00963 LINC00963 N/A long intergenic non-protein coding RNA 963
LINC00964 LINC00964 N/A long intergenic non-protein coding RNA 964
LINC00970 LINC00970 N/A long intergenic non-protein coding RNA 970
LINC00974 LINC00974 N/A long intergenic non-protein coding RNA 974
LINC00977 LINC00977 N/A long intergenic non-protein coding RNA 977
LINC00982 LINC00982 FLJ42875 long intergenic non-protein coding RNA 982
LINC00993 LINC00993 N/A long intergenic non-protein coding RNA 993
LINC00994 LINC00994 N/A long intergenic non-protein coding RNA 994
LINC00996 LINC00996 N/A long intergenic non-protein coding RNA 996
LINC01016 LINC01016 N/A long intergenic non-protein coding RNA 1016
LINC01018 LINC01018 N/A long intergenic non-protein coding RNA 1018
LINC01019 LINC01019 N/A long intergenic non-protein coding RNA 1019
LINC01020 LINC01020 N/A long intergenic non-protein coding RNA 1020
LINC01021 LINC01021 N/A long intergenic non-protein coding RNA 1021
LINC01024 LINC01024 MA-linc1 long intergenic non-protein coding RNA 1024
LINC01029 LINC01029 N/A long intergenic non-protein coding RNA 1029
LINC01080 LINC01080 TCONSN/A00021856 long intergenic non-protein coding RNA 1080
LINC01081 LINC01081 TCONSN/A00024764 long intergenic non-protein coding RNA 1081
LINC01082 LINC01082 TCONSN/A00024492 long intergenic non-protein coding RNA 1082
LINC01089 LINC01089 N/A long intergenic non-protein coding RNA 1089
LINC01090 LINC01090 N/A long intergenic non-protein coding RNA 1090
LINC01091 LINC01091 N/A long intergenic non-protein coding RNA 1091
LINC01096 LINC01096 N/A long intergenic non-protein coding RNA 1096
LINC01105 LINC01105 FLJ30594, LOC150622 long intergenic non-protein coding RNA 1105
LINC01108 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108
LINC01122 LINC01122 FLJ30838 long intergenic non-protein coding RNA 1122
LINC01133 LINC01133 N/A long intergenic non-protein coding RNA 1133
LINC01139 LINC01139 N/A long intergenic non-protein coding RNA 1139
LINC01140 LINC01140 FLJ41676 long intergenic non-protein coding RNA 1140
LINC01150 LINC01150 2G7, TCONSN/A00019134 long intergenic non-protein coding RNA 1150
LINC01152 LINC01152 TCONSN/A00025128, CMPD long intergenic non-protein coding RNA 1152
LINC01154 LINC01154 N/A long intergenic non-protein coding RNA 1154
LINC01157 LINC01157 TCONSN/A00010378, linc-Enc1 long intergenic non-protein coding RNA 1157
LINC01158 LINC01158 linc-Brn1a long intergenic non-protein coding RNA 1158
LINC01159 LINC01159 linc-Brn1b long intergenic non-protein coding RNA 1159
LINC01184 LINC01184 FLJ33630 long intergenic non-protein coding RNA 1184
LINC01185 LINC01185 FLJ16341 long intergenic non-protein coding RNA 1185
LINC01191 ENST00000412690.1 VIN, lnc-ACTR3 long intergenic non-protein coding RNA 1191
LINC01192 LINC01192 N/A long intergenic non-protein coding RNA 1192
LINC01193 LINC01193 LOC348120 long intergenic non-protein coding RNA 1193
LINC01194 LINC01194 TAG long intergenic non-protein coding RNA 1194
LINC01202 LINC01202 N/A long intergenic non-protein coding RNA 1202
LINC01207 LINC01207 N/A long intergenic non-protein coding RNA 1207
LINC01225 LINC01225 N/A long intergenic non-protein coding RNA 1225
LINC01228 LINC01228 lincRNA-DYNLRB2-2 long intergenic non-protein coding RNA 1228
LINC01230 LINC01230 linc-DMRT2, lnc-DRMT2, TCONSN/A00015639 long intergenic non-protein coding RNA 1230
LINC01232 LINC01232 FLJ41590, TCONSN/A00021520 long intergenic non-protein coding RNA 1232
LINC01233 LINC01233 XLOCN/A013014 long intergenic non-protein coding RNA 1233
LINC01234 LINC01234 onco-lncRNA-32 long intergenic non-protein coding RNA 1234
LINC01252 LINC01252 N/A long intergenic non-protein coding RNA 1252
LINC01262 LINC01262 TCONSN/Al2N/A00021807, RP11-462G22.1 long intergenic non-protein coding RNA 1262
LINC01264 LINC01264 RP11-124O11.2 long intergenic non-protein coding RNA 1264
LINC01268 LINC01268 LOC285758 long intergenic non-protein coding RNA 1268
LINC01296 LINC01296 FLJ39632 long intergenic non-protein coding RNA 1296
LINC01312 LINC01312 MGC34034 long intergenic non-protein coding RNA 1312
LINC01317 LINC01317 N/A long intergenic non-protein coding RNA 1317
LINC01370 LINC01370 HI-LNC25 long intergenic non-protein coding RNA 1370
LINC01374 LINC01374 TCONSN/A00018278 long intergenic non-protein coding RNA 1374
LINC01405 LINC01405 N/A long intergenic non-protein coding RNA 1405
LINC01411 LINC01411 RP11-267A15.1 long intergenic non-protein coding RNA 1411
LINC01420 LINC01420 N/A long intergenic non-protein coding RNA 1420
LINC01433 LINC01433 LOC728228 long intergenic non-protein coding RNA 1433
LINC01435 LINC01435 RP11-215N21.1, TCONSN/A00018040 long intergenic non-protein coding RNA 1435
LINC01436 LINC01436 AP000688.8 long intergenic non-protein coding RNA 1436
LINC01468 LINC01468 lnc-MBL2-4 long intergenic non-protein coding RNA 1468
LINC01478 LINC01478 N/A long intergenic non-protein coding RNA 1478
LINC01501 LINC01501 N/A long intergenic non-protein coding RNA 1501
LINC01503 LINC01503 lnc-PPP2R4-5 long intergenic non-protein coding RNA 1503
LINC01507 LINC01507 XLOCN/A000303 long intergenic non-protein coding RNA 1507
LINC01511 LINC01511 RP11-325I22.2 long intergenic non-protein coding RNA 1511
LINC01512 LINC01512 LOC100132354, TCONSN/A00011120, HI-LNC77 long intergenic non-protein coding RNA 1512
LINC01513 LINC01513 RP11-1C1.7, TCONSN/A00009352 long intergenic non-protein coding RNA 1513
LINC01525 LINC01525 lnc-MAN1A2-1 long intergenic non-protein coding RNA 1525
LINC01526 LINC01526 Lnc-FAM46A-1 long intergenic non-protein coding RNA 1526
LINC01527 LINC01527 lnc-SPRR2D-1 long intergenic non-protein coding RNA 1527
LINC01537 LINC01537 RP11-169D4.1-001 long intergenic non-protein coding RNA 1537
LINC01547 LINC01547 N/A long intergenic non-protein coding RNA 1547
LINC01553 LINC01553 AC023904.2 long intergenic non-protein coding RNA 1553
LINC01558 LINC01558 HGC6.2, dJ431P23.4 long intergenic non-protein coding RNA 1558
LINC01559 LINC01559 FLJ33810 long intergenic non-protein coding RNA 1559
LINC01560 LINC01560 N/A long intergenic non-protein coding RNA 1560
LINC01562 LINC01562 RP11-296A18.3 long intergenic non-protein coding RNA 1562
LINC01564 LINC01564 TCONSN/A00011314 long intergenic non-protein coding RNA 1564
LINC01565 LINC01565 GR6 long intergenic non-protein coding RNA 1565
LINC01574 LINC01574 HI-LNC12, TCONSN/A00009551 long intergenic non-protein coding RNA 1574
LINC01587 LINC01587 aC1 long intergenic non-protein coding RNA 1587
LINC01589 LINC01589 CTA-941F9.9, TCONSN/A00029353 long intergenic non-protein coding RNA 1589
LINC01591 LINC01591 N/A long intergenic non-protein coding RNA 1591
LINC01602 LINC01602 T1560 long intergenic non-protein coding RNA 1602
LINC01611 LINC01611 RP1-90L14.1, TCONSN/Al2N/A00025430 long intergenic non-protein coding RNA 1611
LINC01612 LINC01612 RP11-789C1.1, TCONSN/A00008319 long intergenic non-protein coding RNA 1612
LINC01613 LINC01613 n341773 long intergenic non-protein coding RNA 1613
LINC01614 LINC01614 LCAL4, TCONSN/A00003105 long intergenic non-protein coding RNA 1614
LINC01616 LINC01616 n341006 long intergenic non-protein coding RNA 1616
LINC01617 LINC01617 XLOCN/A006844 long intergenic non-protein coding RNA 1617
LINC01618 LINC01618 LOC152578 long intergenic non-protein coding RNA 1618
LINC01622 LINC01622 TCONSN/A00011202 long intergenic non-protein coding RNA 1622
LINC01627 LINC01627 RP11-397D12.4 long intergenic non-protein coding RNA 1627
LINC01628 LINC01628 AC007403.1 long intergenic non-protein coding RNA 1628
LINC01629 LINC01629 linc-KIAA1737-2 long intergenic non-protein coding RNA 1629
LINCMD1 LINCMD1 N/A long intergenic non-protein coding RNA, muscle differentiation 1
LINC-PINT NONHSAT123382 FLJ43663, PINT, LincRNA-Pint long intergenic non-protein coding RNA, p53 induced transcript
lincRNA-ROR NONHSAT059436 ROR, lincRNA-ST8SIA3, ENSG00000258609 long intergenic non-protein coding RNA, regulator of reprogramming
LINGO1-AS1 LINGO1-AS1 N/A LINGO1 antisense RNA 1
LMCD1-AS1 LMCD1-AS1 N/A LMCD1 antisense RNA 1 (head to head)
LOC100887755 lnc-SNAI1-1:1 Noncoding RNA activating7: ncRNA-a7, ENST00000431460.1,ENSG00000231265,TRERNA1 translation regulatory long non-coding RNA 1
LOH12CR2 LOH12CR2 LOH2CR12 loss of heterozygosity, 12, chromosomal region 2 (non-protein coding)
LOXL1-AS1 LOXL1-AS1 N/A LOXL1 antisense RNA 1
LPP-AS2 LPP-AS2 N/A LPP antisense RNA 2
LRP1-AS LRP1-AS N/A LRP1 antisense RNA
LRRC75A-AS1 LRRC75A-AS1 MGC40157 LRRC75A antisense RNA 1
LSINCT5 LSINCT5 N/A long stress-induced non-coding transcript 5
LUADT1 LUADT1 N/A lung adenocarcinoma associated transcript 1
LUCAT1 ENST00000511918.1 SCAL1 lung cancer associated transcript 1 (non-protein coding)
LUNAR1 LUNAR1 N/A leukemia-associated non-coding IGF1R activator RNA 1
MAFA-AS1 MAFA-AS1 RP11-909N17.3, TCONSN/A00014882 MAFA antisense RNA 1
MAFG-AS1 MAFG-AS1 N/A MAFG antisense RNA 1 (head to head)
MAFTRR MAFTRR linc-MAF-4 MAF transcriptional regulator RNA
MAGEA8-AS1 MAGEA8-AS1 RP5-869M20.2 MAGEA8 antisense RNA 1 (head to head)
MALAT1 ENST00000534336.1 HCN, hepcarcin, LINC00047, long intergenic non-protein coding RNA 47, MALAT-1, mascRNA, metastasis associated in lung adenocarcinoma transcript 1, NCRNA00047, NEAT2, non-protein coding RNA 47, nuclear enriched abundant transcript 2, nuclear paraspeckle assembly transcript 2 (non-protein coding), PRO1073, ENSG00000251562 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)
MAPKAPK5-AS1 MAPKAPK5-AS1 FLJ39616 MAPKAPK5 antisense RNA 1
mascRNA lnc-SCYL1-1:5 Malat1 mascRNA (MALAT1-associated small cytoplasmic RNA)
MCM3AP-AS1 MCM3AP-AS1 FLJ10508, NCRNA00031 MCM3AP antisense RNA 1
MDC1-AS1 MDC1-AS1 MDC1-AS MDC1 antisense RNA 1
MEF2C-AS1 MEF2C-AS1 N/A MEF2C antisense RNA 1
MEG3 NONHSAT039745 Gtl2, ENSG00000214548 maternally expressed 3 (non-protein coding)
MEG8 ENST00000553584.1 Bsr, Imprinted RNA near Meg3/Gtl2, Irm, LINC00024, long intergenic non-protein coding RNA 24, NCRNA00024, non-protein coding RNA 24, Rian, RNA Imprinted and Accumulated in Nucleus, ENSG00000258399 Rian: RNA Imprinted and Accumulated in Nucleus;Irm: Imprinted RNA near Meg3/Gtl2;MEG8: Maternally expressed gene 8
MEG9 ENST00000553584.1,[[ LINC00584 maternally expressed 9 (non-protein coding)
MESTIT1 MESTIT1 NCRNA00040, MEST-AS1 MEST intronic transcript 1, antisense RNA
MGAT3-AS1 MGAT3-AS1 TapSAKI MGAT3 antisense RNA 1
MHRT MHRT Myheart myosin heavy chain-associated RNA transcript
MIAT lnc-CRYBA4-2:1 FLJ25967, gomafu, LINC00066, lncRNA-MIAT, long intergenic non-protein coding RNA 66, NCRNA00066, non-protein coding RNA 66, Rncr2 myocardial infarction associated transcript (non-protein coding)
MIF-AS1 MIF-AS1 LOC284889 MIF antisense RNA 1
MIMT1 MIMT1 MIM1, NCRNA00067, LINC00067 MER1 repeat containing imprinted transcript 1 (non-protein coding)
MINCR ENST00000517411.1 TCONSN/A00015189 MYC-induced long noncoding RNA
MIR100HG ENST00000531381.1 AGD1, lncRNA-N2 mir-100-let-7a-2 cluster host gene
MIR137HG MIR137HG N/A MIR137 host gene
MIR155HG NONHSAT081499 BIC, NCRNA00172 MIR155 host gene
MIR17HG MIR17HG FLJ14178, MIRH1, MIHG1, NCRNA00048, miR-17-92, LINC00048 miR-17-92a-1 cluster host gene
MIR181A2HG MIR181A2HG N/A MIR181A2 host gene
MIR210HG MIR210HG N/A MIR210 host gene
MIR222HG ENST00000602507.1 Lnc-Ang362 MIR222 host gene
MIR22HG ENST00000574306.1 MGC14376, DKFZp686O06159, LOC554202 MIR22 host gene
MIR34AHG MIR34AHG N/A MIR34A host gene
MIR4435-2HG MIR4435-2HG LINC00978, AGD2, AK001796 MIR4435-2 host gene
MIR503HG MIR503HG MGC16121, H19X MIR503 host gene
MIR600HG MIR600HG GL012, FLJ22161 MIR600 host gene
MIR663AHG MIR663AHG RP3-410C9.1 MIR663A host gene
MIR7-3HG MIR7-3HG PGSF1, PGSF1a, PGSF1b, Huh7, uc002mbe.2 MIR7-3 host gene
MIR99AHG ENST00000602580.1 MONC mir-99a-let-7c cluster host gene
MIRLET7BHG MIRLET7BHG linc-Ppara MIRLET7B host gene
MIRLET7DHG MIRLET7DHG N/A MIRLET7D host gene
MKRN3-AS1 MKRN3-AS1 FNZ127, NCRNA00009, ZNF127-AS MKRN3 antisense RNA 1
MLK7-AS1 MLK7-AS1 N/A MLK7 antisense RNA 1
MLLT4-AS1 MLLT4-AS1 HGC6.4, dJ431P23.3 MLLT4 antisense RNA 1 (head to head)
MORF4L2-AS1 MORF4L2-AS1 N/A MORF4L2 antisense RNA 1
MT-LIPCAR MT-LIPCAR uc022bqs.1, LIPCAR mitochondrially encoded long non-coding cardiac associated RNA
MYCNOS MYCNOS NCYM, N-CYM, MYCN-AS1 MYCN opposite strand
MYCNUT ENST00000433810.1 lncUSMycN MYCN upstream transcript (non-protein coding)
N4BP2L2-IT2 N4BP2L2-IT2 CG030 N4BPL2 intronic transcript 2
NALT1 NALT1 TCONSN/Al2N/A00029132 NOTCH1 associated lncRNA in T-cell acute lymphoblastic leukemia 1
NAMA ENST00000604258.1 N/A non-protein coding RNA, associated with MAP kinase pathway and growth arrest
NBAT1 NBAT1 NBAT-1 neuroblastoma associated transcript 1
NBR2 NBR2 NCRNA00192 neighbor of BRCA1 gene 2 (non-protein coding)
NCBP2-AS2 NCBP2-AS2 N/A NCBP2 antisense RNA 2 (head to head)
NCOA7-AS1 NCOA7-AS1 N/A NCOA7 antisense RNA 1
ncR-PAR NONHSAT102247 NCRUPAR, ENSG00000225407 non-protein coding RNA, upstream of F2R/PAR1
NCRUPAR NCRUPAR ncR-uPAR, ncRuPAR, NCRNA00193 non-protein coding RNA, upstream of F2R/PAR1
NDM29 lnc-C11orf16-1:1 29A neuroblastoma differentiation marker 29 (Castelnuovo (2010),?Pagano (2007)).
NEAT1 ENST00000501122.2,NONHSAT022111 MEN epsilon/beta, VINC, TncRNA, linc1317, ENSG00000245532 Nuclear enriched abundant transcript 1.
NFIA-AS1 NFIA-AS1 RP5-833A20.1 NFIA antisense RNA 1
NIPBL-AS1 NIPBL-AS1 NIPBL-AS NIPBL antisense RNA 1 (head to head)
NKILA NKILA N/A NF-kappaB interacting long non-coding RNA
NKX2-2-AS1 NKX2-2-AS1 NKX2-2AS NKX2-2 antisense RNA 1
NOP14-AS1 NOP14-AS1 RES4-24 NOP14 antisense RNA 1
NORAD NORAD N/A non-coding RNA activated by DNA damage
NPHP3-AS1 NPHP3-AS1 N/A NPHP3 antisense RNA 1
NPPA-AS1 NPPA-AS1 N/A NPPA antisense RNA 1
NPSR1-AS1 NPSR1-AS1 AAA1, IMAGE:4827585 NPSR1 antisense RNA 1
NPTN-IT1 NPTN-IT1 lncRNA-LET NPTN intronic transcript 1
NR2F1-AS1 NR2F1-AS1 FLJ42709 NR2F1 antisense RNA 1
NRAV NRAV N/A negative regulator of antiviral response (non-protein coding)
NRIR ENST00000414795.1 lncRNA-CMPK2 negative regulator of interferon response (non-protein coding)
NRON NONHSAT134764 ENSG00000253079 non-protein coding RNA, repressor of NFAT
NTT NONHSAT115106 N/A noncoding transcript in T cells.
OIP5-AS1 ENST00000500949.2 cyrano,LOC729082, linc-NUSAP1-1, OIP5-AS1 OIP5 antisense RNA 1
OLMALINC OLMALINC bA34D15.5, FLJ12974, HI-LNC80 oligodendrocyte maturation-associated long intergenic non-coding RNA
OTX2-AS1 lnc-C14orf101-5:1 OTX2OS1, ENSG00000248550 OTX2 antisense RNA 1 (head to head)
OVAAL ENST00000442621.1 LINC01131,OVAL ovarian adenocarcinoma amplified long non-coding RNA
PACERR ENST00000608917.1 PACER, PTGS2-AS1 PTGS2 antisense NFKB1 complex-mediated expression regulator RNA
PANCR PANCR N/A PITX2 adjacent non-coding RNA
PANDAR lnc-CDKN1A-1:1 P21 associated ncRNA DNA damage activated, PANDA antisense RNA, ENSG00000213500, PANDAR promoter of CDKN1A antisense DNA damage activated RNA
PAPPA-AS1 PAPPA-AS1 PAPPA-AS, DIPAS, TAF4B, TAF2C2, TAFII105, NCRNA00156 PAPPA antisense RNA 1
PAPPA-AS2 PAPPA-AS2 AGU1 PAPPA antisense RNA 2
PART1 ENST00000506884.1 DKFZP586D0823, NCRNA00206 prostate androgen-regulated transcript 1 (non-protein coding)
PARTICL PARTICL PARTICLE promoter of MAT2A antisense radiation-induced circulating long non-coding RNA
PAUPAR NONHSAT018635 N/A PAX6 upstream antisense RNA
PAXIP1-AS1 PAXIP1-AS1 N/A PAXIP1 antisense RNA 1 (head to head)
PCA3 ENST00000412654.1 DD3, NCRNA00019, PCAT3 prostate cancer associated 3 (non-protein coding)
PCAT1 ENST00000561978.1 PCAT-1, PCA1 prostate cancer associated transcript 1 (non-protein coding)
PCAT14 PCAT14 N/A prostate cancer associated transcript 14 (non-protein coding)
PCAT18 PCAT18 LINC01092 prostate cancer associated transcript 18 (non-protein coding)
PCAT19 PCAT19 LINC01190 prostate cancer associated transcript 19 (non-protein coding)
PCAT29 PCAT29 N/A prostate cancer associated transcript 29 (non-protein coding)
PCAT4 PCAT4 GDEP, PCAN1, PCA4 prostate cancer associated transcript 4 (non-protein coding)
PCAT5 PCAT5 TPCAT-10-36067 prostate cancer associated transcript 5 (non-protein coding)
PCAT6 ENST00000425295.1,ENST00000553157.1,ENST00000417262.1 N/A Noncoding RNA activating2: ncRNA-a2, KDM5B antisense RNA 1 (KDM5B-AS1),, ENSG00000228288
PCAT7 PCAT7 PCAN-R2 prostate cancer associated transcript 7 (non-protein coding)
PCBP2-OT1 PCBP2-OT1 TUC338 PCBP2 overlapping transcript 1
PCBP3-OT1 PCBP3-OT1 FLJ44028 PCBP3 overlapping transcript 1
PCF11-AS1 PCF11-AS1 ENST00000602322.1 PCF11 anstisense RNA 1
PCGEM1 NONHSAT076153 ENSG00000227418; PCAT9; LINC00071; NCRNA00071 lncRNA Prostate-specific transcript 1
PCNA-AS1 PCNA-AS1 N/A PCNA antisense RNA 1
PEG13 PEG13 N/A paternally expressed 13
PEG3-AS1 PEG3-AS1 APEG3, NCRNA00155 PEG3 antisense RNA 1
PICSAR PICSAR PRED74, NLC1-C P38 inhibited cutaneous squamous cell carcinoma associated lincRNA
PINK1-AS PINK1-AS FLJ00387, PINK1AS, naPINK1 PINK1 antisense RNA
PISRT1 PISRT1 NCRNA00195 polled intersex syndrome regulated transcript 1 (non-protein coding RNA)
PR antisense transcripts NONHSAT023851 N/A N/A
PRINS NONHSAT011777 ENSG00000238115 Psoriasis susceptibility-related RNA Gene Induced by Stress
PRKCQ-AS1 PRKCQ-AS1 ENST00000414894.1 PRKCQ antisense RNA 1
PRNCR1 NONHSAT129019 N/A prostate cancer associated non-coding RNA 1
PRR7-AS1 PRR7-AS1 N/A PRR7 antisense RNA 1
PSMA3-AS1 PSMA3-AS1 FLJ31306 PSMA3 antisense RNA 1
PSMD5-AS1 PSMD5-AS1 N/A PSMD5 antisense RNA 1 (head to head)
PTCSC1 NONHSAT129210 AK023948, NCRNA00197 papillary thyroid carcinoma susceptibility candidate 1 (non-protein coding)
PTCSC2 ENST00000430058.1 N/A papillary thyroid carcinoma susceptibility candidate 2 (non-protein coding)
PTCSC3 ENST00000556013.2 N/A papillary thyroid carcinoma susceptibility candidate 3 (non-protein coding)
PTENP1 NONHSAT130775 PTENpg1, PTEN2, ENSG00000237984 PTEN Pseudogene 1
PTENP1-AS PTENP1-AS PTENpg1-asRNA PTENP1 antisense RNA
PTPRJ-AS1 PTPRJ-AS1 N/A PTPRJ antisense RNA 1
PVT1 ENST00000513868.2 NCRNA00079, LINC00079, onco-lncRNA-100 Pvt1 oncogene (non-protein coding)
PWAR1 PWAR1 PAR1, PAR-1 Prader Willi/Angelman region RNA 1
PWAR4 PWAR4 PAR4, PAR-4 Prader Willi/Angelman region RNA 4
PWAR5 PWAR5 PAR5, PAR-5 Prader Willi/Angelman region RNA 5
PWARSN PWARSN PAR-SN, PARSN Prader Willi/Angelman region RNA, SNRPN neighbor
PWRN1 NONHSAT040920 NCRNA00198 Prader-Willi region non-protein coding RNA 1
PWRN2 NONHSAT040875 NCRNA00199 Prader-Willi region non-protein coding RNA 2
RAD51-AS1 RAD51-AS1 TODRA RAD51 antisense RNA 1 (head to head)
RASSF1-AS1 RASSF1-AS1 RASSF1 antisense RNA 1 ANRASSF1
RBM5-AS1 NONHSAT089783 LUCA-15-specific transcript, LUST, ENSG00000003756 RBM5 antisense RNA 1
RFPL1S RFPL1S RFPL1-AS, NCRNA00006 RFPL1 antisense RNA 1
RGMB-AS1 RGMB-AS1 N/A RGMB antisense RNA 1
RHPN1-AS1 RHPN1-AS1 MGC3113 RHPN1 antisense RNA 1 (head to head)
RMST RMST NCRMS, NCRNA00054, LINC00054 rhabdomyosarcoma 2 associated transcript (non-protein coding)
RNF217-AS1 RNF217-AS1 STL RNF217 antisense RNA 1 (head to head)
RNF219-AS1 RNF219-AS1 N/A RNF219 antisense RNA 1
RPL34-AS1 RPL34-AS1 FLJ37673, RP11-462C24.1 RPL34 antisense RNA 1 (head to head)
RPS6KA2-AS1 RPS6KA2-AS1 N/A RPS6KA2 antisense RNA 1
RUSC1-AS1 RUSC1-AS1 FLJ35976 RUSC1 antisense RNA 1
SALRNA1 SALRNA1 SAL-RNA1, XLOCN/A023166 senescence associated long non-coding RNA 1
SALRNA2 SALRNA2 SAL-RNA2, XLOCN/A025931 senescence associated long non-coding RNA 2
SALRNA3 SALRNA3 SAL-RNA3, XLOCN/A025918 senescence associated long non-coding RNA 3
SAMD12-AS1 SAMD12-AS1 N/A SAMD12 antisense RNA 1
SAMMSON SAMMSON N/A survival associated mitochondrial melanoma specific oncogenic non-coding RNA
SAP30L-AS1 SAP30L-AS1 FLJ38109, GALNT10-AS1 SAP30L antisense RNA 1 (head to head)
SCAANT1 SCAANT1 SCA7/ATXN7 antisense RNA 1 ATXN7-AS1
SCHLAP1 NONHSAT075852 SWI/SNF complex antagonist associated with prostate cancer 1 (non-protein coding) SChLAP1,PCAT11
SEC24B-AS1 SEC24B-AS1 1/2-SBSRNA4 SEC24B antisense RNA 1
SENCR ENST00000526269.2 smooth muscle and endothelial cell enriched migration/differentiation-associated long non-coding RNA N/A
SGMS1-AS1 SGMS1-AS1 N/A SGMS1 antisense RNA 1
SIRT1-AS SIRT1-AS N/A SIRT1 antisense RNA
SMAD1-AS1 SMAD1-AS1 ENST00000513542 SMAD1 antisense RNA 1
SMAD5-AS1 SMAD5-AS1 DAMS SMAD5 antisense RNA 1
SMCR2 SMCR2 N/A Smith-Magenis syndrome chromosome region, candidate 2 (non-protein coding)
SMCR5 SMCR5 NCRNA00034 Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding)
SMCR6 SMCR6 N/A Smith-Magenis syndrome chromosome region, candidate 6 (non-protein coding)
SMG7-AS1 SMG7-AS1 DKFZP564C196 SMG7 antisense RNA 1
SNAI3-AS1 SNAI3-AS1 MGC23284 SNAI3 antisense RNA 1
snaR lnc-BSPH1-1:1,lnc-BSPH1-2:1 small NF90-associated RNAs small NF90-associated RNAs
SNHG1 NONHSAT021826 UHG, ENSG00000255717 SNHG1:Small nucleolar RNA host gene 1;UHG: U22 host gene.
SNHG10 SNHG10 FLJ40557, NCRNA00063, LINC00063 small nucleolar RNA host gene 10
SNHG11 SNHG11 LINC00101 small nucleolar RNA host gene 11
SNHG12 SNHG12 PNAS-123, LINC00100, ASLNC04080 small nucleolar RNA host gene 12
SNHG14 SNHG14 NCRNA00214, UBE3A-AS small nucleolar RNA host gene 14
SNHG15 SNHG15 FLJ38860, MYO1GUT, Linc-Myo1g small nucleolar RNA host gene 15
SNHG16 NONHSAT056039 ncRAN small nucleolar RNA host gene 16
SNHG20 SNHG20 PRO0872, FLJ25582, DKFZp686L05235, SCARNA16HG small nucleolar RNA host gene 20
SNHG3 lnc-OR10H5-1:1 U17HG, linc1343, ENSG00000242125 Small nucleolar RNA host gene 3
SNHG4 NONHSAT104072 U19H, ENSG00000200959 Small nucleolar RNA host gene 4
SNHG5 NONHSAT054526 U50HG, ENSG00000203875 Small nucleolar RNA host gene 5
SNHG6 lnc-TCF24-2:3 U87HG, ENSG00000245910 Small nucleolar RNA host gene 6
SNHG7 SNHG7 MGC16037, NCRNA00061 small nucleolar RNA host gene 7
SNHG8 SNHG8 NCRNA00060, LINC00060 small nucleolar RNA host gene 8
SOCS2-AS1 SOCS2-AS1 N/A SOCS2 antisense RNA 1
SOX21-AS1 SOX21-AS1 N/A SOX21 antisense RNA 1 (head to head)
SOX2-OT SOX2-OT DKFZp761J1324, NCRNA00043 SOX2 overlapping transcript
SPATA3-AS1 SPATA3-AS1 N/A SPATA3 antisense RNA 1 (head to head)
SPRY4-IT1 lnc-NDFIP1-3:1 AK024556, ENSG00000274721 SPRY4 intronic transcript 1 (non-protein coding)
SRA lnc-SRA1-1:1 SRA1, ENSG00000213523 Steroid receptor RNA Activator
ST7-AS1 ST7-AS1 ST7AS1 ST7 antisense RNA 1
ST7-AS2 ST7-AS2 ST7AS2 ST7 antisense RNA 2
ST7OT NONHSAT122926,NONHSAT122918,NONHSAT122914,NONHSAT122932 ST7OT1, ST7OT2, ST7OT3, ST7OT4, ST7AS1, ST7AS2, ST7AS3, ST7AS4, ENSG00000214188 N/A
ST7-OT3 ST7-OT3 NCRNA00026 ST7 overlapping transcript 3
STAM-AS1 STAM-AS1 locus3182 STAM antisense RNA 1 (head to head)
STX18-AS1 STX18-AS1 LOC100507266 STX18 antisense RNA 1 (head to head)
TARID ENST00000607033.1 N/A TCF21 antisense RNA inducing promoter demethylation
TCL6 TCL6 TCL6e1, TNG2, TNG1 T-cell leukemia/lymphoma 6 (non-protein coding)
TDRG1 NONHSAT112472 LINC00532, lincRNA-NRN/A024015 testis development related 1 (non-protein coding)
TEA-ncRNAs NONHSAT035776 ENSG00000251002 T early alpha
TEX41 TEX41 DKFZp686O1327, LINC00953 testis expressed 41 (non-protein coding)
TGFB2-OT1 TGFB2-OT1 FLJ11812 TGFB2 overlapping transcript 1
TH2LCRR TH2LCRR TH2-LCR T helper type 2 locus control region associated RNA
THRIL Lnc-DHX37-1:1 Linc1992, TCONSN/A00020260, BRI3BP-AS1 TNF and HNRNPL related immunoregulatory long non-coding RNA
TINCR ENST00000448587.1 FLJ90734, NCRNA00036, LINC00036, onco-lncRNA-16 tissue differentiation-inducing non-protein coding RNA
TLX1NB TLX1NB TD1, TDI, APT-B7 TLX1 neighbor
TMEM161B-AS1 lnc-RASA1-3:23,lnc-RASA1-3:25 AK082072,linc-POLR3G-8, ENSG00000247828 TMEM161B antisense RNA 1
TMEM92-AS1 TMEM92-AS1 RP11-893F2.9, lncRNA-508851, TCONSN/A00025237 TMEM92 antisense RNA 1
TMEM9B-AS1 TMEM9B-AS1 N/A TMEM9B antisense RNA 1
TncRNA NONHSAT022116 TSU TncRNA: trophoblast noncoding RNA; TSU: trophoblast STAT utron (untranslated region of an mRNA).
TOLLIP-AS1 TOLLIP-AS1 N/A TOLLIP antisense RNA 1 (head to head)
TP53COR1 TP53COR1 linc-p21, lincRNA-p21, Trp53cor1 tumor protein p53 pathway corepressor 1 (non-protein coding)
TP53TG1 TP53TG1 HN/ARG012D21.9, LINC00096 TP53 target 1 (non-protein coding)
TP73-AS1 TP73-AS1 PDAM TP73 antisense RNA 1
TRERNA1 TRERNA1 ncRNA-a7, treRNA translation regulatory long non-coding RNA 1
TRPM2-AS TRPM2-AS TRPM2-AS1 TRPM2 antisense RNA
TSIX TSIX NCRNA00013, XIST-AS1, LINC00013 TSIX transcript, XIST antisense RNA
TSPEAR-AS2 TSPEAR-AS2 N/A TSPEAR antisense RNA 2
TTC28-AS1 TTC28-AS1 KIAA1648 TTC28 antisense RNA 1
TTTY15 TTTY15 DKFZP434I143, NCRNA00138 testis-specific transcript, Y-linked 15 (non-protein coding)
TTTY17A TTTY17A NCRNA00140 testis-specific transcript, Y-linked 17A (non-protein coding)
TTTY3 TTTY3 TTY3, TTTY3A, LINC00121 testis-specific transcript, Y-linked 3 (non-protein coding)
TTTY4 TTTY4 TTY4, TTTY4A, LINC00123 testis-specific transcript, Y-linked 4 (non-protein coding)
TTTY5 TTTY5 TTY5, LINC00126 testis-specific transcript, Y-linked 5 (non-protein coding)
TTTY6 TTTY6 TTY6, TTTY6A, LINC00127 testis-specific transcript, Y-linked 6 (non-protein coding)
TTTY9B TTTY9B NCRNA00132 testis-specific transcript, Y-linked 9B (non-protein coding)
TUG1 NONHSAT084827 ENSG00000253352 taurine up-regulated gene 1(Young (2005)).
TUNAR TUNAR TUNA, HI-LNC78 TCL1 upstream neural differentiation-associated RNA
TUSC7 NONHSAT091315 LINC00902, LOC285194, ENSG00000243197 tumor suppressor candidate 7 (non-protein coding)
TUSC8 TUSC8 XLOCN/A010588 tumor suppressor candidate 8 (non-protein coding)
UCA1 lnc-OR10H5-1:1 UCA1a, CUDR, UCAT1, LINC00178, NCRNA00178, GCAP2, GUCA1B, GUCA2, RP48, ENSG00000214049 urothelial cancer associated 1 (non-protein coding)
UMODL1-AS1 UMODL1-AS1 FLJ33471 UMODL1 antisense RNA 1
VLDLR-AS1 VLDLR-AS1 N/A VLDLR antisense RNA 1
WAC-AS1 WAC-AS1 N/A WAC antisense RNA 1 (head to head)
WASIR2 WASIR2 N/A WASH and IL9R antisense RNA 2
WDFY3-AS2 WDFY3-AS2 FBI4 WDFY3 antisense RNA 2
WFDC21P Lnc-HEATR6-1:4 WAP four-disulfide core domain 21, pseudogene LOC645638, lnc-DC, LNCDC
WSPAR WSPAR TCONSN/A00009511-XLOCN/A004555, lncTCF7 WNT signaling pathway activating non-coding RNA
WT1-AS lnc-EIF3M-1:1 WIT1, ENSG00000183242 WT1 (Wilms' tumor 1) antisense transcript
XACT XACT N/A X active specific transcript (non-protein coding)
XIST NONHSAT137541 ENSG00000229807 X inactive-specific transcript
Y RNAs lnc-PDIA4-1:1 N/A N/A
YAM1 YAM1 Yam-1 YY1-associated myogenesis RNA 1
ZBED3-AS1 ZBED3-AS1 N/A ZBED3 antisense RNA 1
ZEB1-AS1 ZEB1-AS1 N/A ZEB1 antisense RNA 1
ZEB2-AS1 NONHSAT074775 Zeb2NAT, ENSG00000238057 Zeb2 natural antisense transcript
ZFAS1 NONHSAT080206 Znfx1 antisense, 1500012F01Rik, NCRNA00275, ENSG00000177410 ZNFX1 antisense RNA 1
ZFAT-AS1 ZFAT-AS1 SAS-ZFAT, NCRNA00070 ZFAT antisense RNA 1
Zfhx2as ENST00000554403.1 Zfh-5AS, ENSG00000157306 zinc finger homeobox 2, antisense
ZIM2-AS1 ZIM2-AS1 ZIM2as ZIM2 antisense RNA 1
ZNF205-AS1 ZNF205-AS1 MGC3771 ZNF205 antisense RNA 1
ZNF252P-AS1 ZNF252P-AS1 N/A ZNF252P antisense RNA 1
ZNF436-AS1 ZNF436-AS1 FLJ90508 ZNF436 antisense RNA 1
ZNF582-AS1 ZNF582-AS1 N/A ZNF582 antisense RNA 1 (head to head)
ZNF667-AS1 ZNF667-AS1 MORT ZNF667 antisense RNA 1 (head to head)
ZRANB2-AS2 ZRANB2-AS2 N/A ZRANB2 antisense RNA 2 (head to head)
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