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Data

Input data text:

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Input data text:

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Example file

Parameters

Input Type

Result Type

Interested RBP

Threads

DS p-value

DS dPSI

RBP cutoff

Corr Method

Net total

Net deal

Net dPSI cutoff

Net regulate cutoff

Net Ratio 1

Net Ratio 2

If Group

If Single-cell

If Smooth

If BS

Net Primary

References

Instructions

MRAS is designed to identify the critical splicing factors whose altered expression drives extensive splicing abnormalities.

m, n: The number of samples of condition 1/2;
DS p-value/dPSI: The threshold for differential splicing;
RBP Cutoff: The cutoff of RBP expression between two conditions;
Corr Method: The method of finding correlation;
Net Total/Deal: the untreated/treated network inferred by MRAS;
Net Ratio 1/2: The ratio of samples to construct the network;

If Group: If consider the synergy between RBPs;
If Single Cell: If single cell data;
If Smooth：The network building type.
If BS： RBP binding matrix.

Contributor(s)

Lei Zhou

zhoulei@big.ac.cn

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