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BarBoxComutationDotForestHeatmapHistogramLollipopMafsummaryMaftitvManhattanOncoprintPM-AdiversityPM-comp-corPM-comp-funcPM-comp-taxaPM-DistributionPM-HclusterPM-HeatmapPM-Marker-CorrPM-Marker-RFscorePM-Marker-TestPM-NetworkPM-PcaPM-PcoaPM-plot-taxaPM-rare-curvQ-QSurvivalUpsetVenn
Sequence alignment
BLASTDotmatcherDotpathDottupNeedlePM-BdiversityPM-extract-rnaPM-parallel-metaPolydotWater
RNA Expression
Bulk RNA-seq Data AnalysisCancer Alternative Splicing AnalysisCCLHunterCIRI-deepCIRI3Cross-disease analysisDisease predictionEditing site annotationEditing site identificationEditingFactorDetectorFunGenGene-disease network constructionNCSelPredRNA-seq AnalysisSingle-cell RNA-seq Data AnalysisSPIRALTIVar diffTIVar predictVisualization of scRNA-seq Data Analysis Results
Variome analysis
BarcodeBLASTBarcodeFindereasyGWASExpPatternGeneFinderHaplotype analysisHapMapHapSnapLeadSNPFinderRice Varieties IdentificationRice Yield EstimationSeqFetchVersionMapWheat Head Estimation
Epigenome analysis
Age PredictorBS-RNAComparative analysis in nucleosomesDMR AnnotationDMR ToolkitEnrichment & AnnotationEnrichment analysis in nucleosome occupancyEWAS Network VisualizationGMQNIDMPLollipop PlotterMRAS
Long non-coding RNA
ClassificationFunctional PredictionID conversionLGClncbook-BLASTLncBot
Virus
COVID-19 genome variation annotationCOVID-19 haplotype analysisDenovo AssemblyEvolutionary treeFastq-to-VariantsGenealogy and Evolutionary AnalysisGenome AnnotationGenome TracingMcANMonkeypox virus genome variation annotationMonkeypox virus genome variation identificationPangolin COVID-19 Lineage AssignerSeqQCVENASVISTA
Single-cell omics
BroCOLICell Type ComparatorCell Type PredictorFGOTGOTSCSESSpaMITACOSUCASpatial
Image Processing
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Others
APAcatcherComposition analysisCross-model analysisCross-species analysisCross-stages analysisHomolog FinderLUTLSRSMEFEMIAMT-trackerncRNA-eQTLPM-parse-mipPM-predict-funcPM-predict-func-contributePM-predict-func-nstiPM-rand-rarePM-select-funcPM-select-taxaPM-split-seqTaxaCal
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