Visualization
ManhattanQ-Q Bar Box Comutation Dot Forest Heatmap Histogram Lollipop MafSummary Oncoprint Survival Maftitv Upset Venn
Sequence alignment
NeedleWaterDotmatcherDotpathDottupPolydot BLAST
Home Visualization
Oncoprint
Data

Parameters

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References

The figure was plotted online using the bioinformatics toolkit (BIT) from the National Genomics Data Center, part of the China National Center for Bioinformation [1]. The R script was implemented with maftools.

[1] "Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022." Nucleic acids research vol. 50,D1 (2022): D27-D38. doi:10.1093/nar/gkab951

Instructions

This app draw Oncoprint plot for a given dataset. 

input format is MAF [https://docs.gdc.cancer.gov/Data/File_Formats/MAF_Format/]
Contributor(s)
Xinchang Zheng
R programmer
Last modified: 2022-03-29