Visualization
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Maftitv
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Sequence alignment
Needle
Water
Dotmatcher
Dotpath
Dottup
Polydot
PM-Bdiversity
BLAST
RNA expression
CIRI3
CIRI-deep
Home
Sequence alignment
BLAST
The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences
Needle
Needleman-Wunsch global alignment of two sequences
Water
Smith-Waterman local alignment of sequences
Dotmatcher
Draw a threshold dotplot of two sequence
Dotpath
Draw a non-overlapping wordmatch dotplot of two sequences
Dottup
Display a wordmatch dotplot of two sequences
Polydot
Draw dotplots for all-against-all comparison of a sequence set
PM-Bdiversity
PMBdiversity