BIT Tools
20 tools
CIRI3 is a comprehensive analysis package for the detection and quantification of circRNAs in RNA-Seq data
Predict differentially spliced circRNAs.
EFDetector is used to identify plant candidate RNA editing factors, including PPR, MORF, ORRM, and OZ, and their subcellular localization.
Fungen is a reference-free tool to construct accurate transcripts using long-read metatranscriptomic data through read clustering and error correction.
Prediction of translation initiation efficiency and changes by SNP/Indel variation.
Prediction of translation initiation efficiency and changes by SNP/Indel variation.
Computing selection pressure of genomic elements.
HELIX is a deep learning model that integrates pre-mRNA sequence and RNA-binding protein (RBP) expression profiles to predict tissue- and condition-specific splicing patterns and transcript isoform usage.
Identification of cancer cell line types by RNA sequencing data
Editing site identification
Disease prediction
Gene-disease network construction
Cross-disease analysis
Editing site annotation
Bulk RNA-seq Data Analysis
Single-cell RNA-seq Data Analysis
Visualization of scRNA-seq Data Analysis Results
Circadian analysis of the single time-point transcriptome data