Visualization
ManhattanQ-Q Bar Box Comutation Dot Forest Heatmap Histogram Lollipop MafSummary Oncoprint Survival Maftitv Upset Venn
Sequence alignment
NeedleWaterDotmatcherDotpathDottupPolydot BLAST
Home Visualization
Mafsummary
Data

Parameters

TRUE
FALSE
TRUE
TRUE
TRUE
FALSE
TRUE
TRUE
FALSE
NULL
NULL
mean
median
FALSE
FALSE
TRUE
d3
npg
aaas
nejm
lancet
jama
jco
ucscgb
d3
locuszoom
igv
uchicago
startrek
tron
futurama
rickandmorty
simpsons
References

The figure was plotted online using the bioinformatics toolkit (BIT) from the National Genomics Data Center, part of the China National Center for Bioinformation [1]. The R script was implemented with maftools.

[1] "Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022." Nucleic acids research vol. 50,D1 (2022): D27-D38. doi:10.1093/nar/gkab951

Instructions

This app draw summary plot for a given dataset.

input format is MAF [https://docs.gdc.cancer.gov/Data/File_Formats/MAF_Format/]
                                        
Contributor(s)
Xinchang Zheng
R programmer
Last modified: 2022-03-29