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Visualization
BarBoxComutationDotForestHeatmapHistogramLollipopMafsummaryMaftitvManhattanOncoprintPM-AdiversityPM-comp-corPM-comp-funcPM-comp-taxaPM-DistributionPM-HclusterPM-HeatmapPM-Marker-CorrPM-Marker-RFscorePM-Marker-TestPM-NetworkPM-PcaPM-PcoaPM-plot-taxaQ-QSurvivalUpsetVenn
Home Visualization
PM-Marker-Test
program
PM-Marker-Test
PM-Marker-Test

Data

Data(adb)
Example file
Meta(txt)
Example file

Parameters

FALSE
True
False
References
Yuzhu Chen JL, Yufeng Zhang, Mingqian Zhang, Zheng Sun, Gongchao Jing, Shi Huang , Xiaoquan Su. Parallel-Meta Suite: interactive and rapid microbiome data analysis on multiple platforms. 2022.
https://github.com/qdu-bioinfo/parallel-meta-suite
Instructions

Candidate biomarker selection by rank sum test

Based on the classification information in the metadata, perform statistical tests between groups, including analysis of variance, T-test, Wilcoxon test, etc., and perform P-value correction. Draw box plots for variables with significant differences and display them by group to visualize the distribution differences of the data. Generate detailed log files recording the analysis process and results, including input parameters and statistical summaries.

Contributor(s)
XiaoQuan Su
suxq@qdu.edu.cn
#Runs
12
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