The figure was plotted online using the bioinformatics toolkit (BIT) from the National Genomics Data Center, part of the China National Center for Bioinformation [1]. The R script was implemented with VennDiagram.
[1] "Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022." Nucleic acids research vol. 50,D1 (2022): D27-D38. doi:10.1093/nar/gkab951
Draw a venn plot for the given dataset
input format is a matrix like this:
A B C D E #header
j b o m g
u e x j t
r m x m h
d u v n x
f p b m o
n j o j q
j h r l q
e g v g a
h j g m a
w g o l k
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The palettes are derived from package ggsci :
npg: Nature Publishing Group
aaas: American Association for the Advancement of Science
nejm: The New England Journal of Medicine
lancet: Lancet Oncology
jama: The Journal of the American Medical Association
jco: Journal of Clinical Oncology
ucscgb: The UCSCGB palette is from the colors used by UCSC Genome Browser for representing chromosomes
d3: The D3 palette is from the categorical colors used by D3.js (version 3.x and before).
locuszoom: The LocusZoom palette is based on the colors used by LocusZoom
igv: The IGV palette is from the colors used by Integrative Genomics Viewer for representing chromosomes
uchicago: The UChicago palette is based on the colors used by the University of Chicago
startrek: This palette is inspired by the (uniform) colors in Star Trek
tron: This palette is inspired by the colors used in Tron Legacy
futurama: This palette is inspired by the colors used in the TV show Futurama
rickandmorty: This palette is inspired by the colors used in the TV show Rick and Morty
simpsons: This palette is inspired by the colors used in the TV show The Simpsons