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RNA-seq AnalysisCancer Alternative Splicing AnalysisCCLHunterEditing site identificationDisease predictionGene-disease network constructionCross-disease analysisEditing site annotationBulk RNA-seq Data AnalysisSingle-cell RNA-seq Data AnalysisVisualization of scRNA-seq Data Analysis Results
Virus
VISTAVENASFastq-to-VariantsCOVID-19 genome variation annotationCOVID-19 haplotype analysisPangolin COVID-19 Lineage AssignerMonkeypox virus genome variation identificationMonkeypox virus genome variation annotationGenome TracingDenovo AssemblyGenome AnnotationSeqQCEvolutionary treeGenealogy and Evolutionary Analysis
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# Program: water
# Rundate: Mon 21 Mar 2022 19:29:31
# Commandline: water
# -asequence sequence_a.faa
# -bsequence sequence_b.faa
# -outfile output_protein.water
# Align_format: srspair
# Report_file: output_protein.water
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#=======================================
#
# Aligned_sequences: 2
# 1: hba_human
# 2: hbb_human
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 145
# Identity: 63/145 (43.4%)
# Similarity: 88/145 (60.7%)
# Gaps: 8/145 ( 5.5%)
# Score: 293.5
#
#
#=======================================
hba_human 3 LSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLS- 50
|:|.:|:.|.|.|||| :..|.|.|||.|:.:.:|.|:.:|..| |||
hbb_human 4 LTPEEKSAVTALWGKV--NVDEVGGEALGRLLVVYPWTQRFFESFGDLST 51
hba_human 51 ----HGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDP 96
.|:.:||.|||||..|.::.:||:|::....:.||:||..||.|||
hbb_human 52 PDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDP 101
hba_human 97 VNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 141
.||:||.:.|:..||.|...||||.|.|:..|.:|.|:..|..||
hbb_human 102 ENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKY 146
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