Plant
Editosome
Database
Summary
| Gene: | rpL16 |
| Function: | Ribosomal protein |
| Species: | 67 |
| Editing Factors: | 25 (bCCP1, DEK53, DYW2, DYW2A, DYW2B, EMP21, EMP5, EMP7, FLO22, GRP23, Lon1, MEF35, MEF37, MEF8, MORF8, NUWA, ORRM2, ORRM3, ORRM4, OTP72, OTP90, PAP2, PCW1, PGN, PPR278) |
| Editing Types: |
|
| Editing Sites: | 335 (C-to-U: 208 NA: 118 U-to-C: 9) |
| External Link: | NCBI Gene |
| Species | Organelle | Editing Sites | Editing Types | Genomic Position | Region | Strand | Type | Codons | Amino Acid |
|---|---|---|---|---|---|---|---|---|---|
| Ampelopteris prolifera | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77801-78205 78958-78966 78965 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Anthoceros angustus | Chloroplast | 7 | C-to-U: 1 NA: 2 U-to-C: 4 | 100307-100708 100389 100408 100615 100632 100679 101664-101672 | CDS NA NA NA NA NA CDS | - + + + + + - | NA U-to-C C-to-U U-to-C U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| Arabidopsis thaliana | Mitochondrion | 6 | C-to-U: 5 NA: 1 | 25076-25615 25104 25110 25176 25387 25407 | CDS NA NA NA NA NA | - + + + + + | NA C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| Asplenium prolongatum | Chloroplast | 1 | U-to-C: 1 | 77837 | NA | + | U-to-C | NA=>NA | NA=>NA |
| Athyrium anisopterum | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77542-77946 78704-78712 78711 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Athyrium opacum | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77380-77784 78542-78550 78549 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Athyrium sheareri | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77531-77938 78694-78702 78701 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Athyrium sinense | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77488-77892 78650-78658 78657 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Austroblechnum melanocaulon | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77619-78023 78780-78788 78787 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Brassica napus | Mitochondrion | 7 | C-to-U: 7 | 201867-202406 201896 201927 202075 202306 202372 202378 | NA NA NA NA NA NA NA | + + + + + + + | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>TERM NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| Calypogeia arguta | Mitochondrion | 1 | NA: 1 | 55210-55617 | CDS | + | NA | NA=>NA | NA=>NA |
| Calypogeia integristipula | Mitochondrion | 1 | NA: 1 | 58186-58593 | CDS | + | NA | NA=>NA | NA=>NA |
| Calypogeia neogaea | Mitochondrion | 1 | NA: 1 | 57088-57495 | CDS | + | NA | NA=>NA | NA=>NA |
| Calypogeia suecica | Mitochondrion | 1 | NA: 1 | 56894-57301 | CDS | + | NA | NA=>NA | NA=>NA |
| Cannabis sativa | Mitochondrion | 1 | NA: 1 | 233652-234086 | CDS | - | NA | NA=>NA | NA=>NA |
| Castilleja paramensis | Mitochondrion | 1 | NA: 1 | 188644-189120 | CDS | + | NA | NA=>NA | NA=>NA |
| Christella appendiculata | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77627-78031 78787-78795 78794 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Citrullus lanatus | Mitochondrion | 3 | C-to-U: 3 | 36424 36528 36631 | CDS CDS CDS | + + + | C-to-U C-to-U C-to-U | ACU=>AUU CUC=>UUC CCA=>CUA | T=>I L=>F P=>L |
| Cucumis sativus | Mitochondrion | 1 | NA: 1 | 736214-736648 | CDS | - | NA | NA=>NA | NA=>NA |
| Cucurbita pepo | Mitochondrion | 5 | C-to-U: 5 | 667051 667179 667282 667348 667354 | CDS CDS CDS CDS CDS | + + + + + | C-to-U C-to-U C-to-U C-to-U C-to-U | ACU=>AUU CUA=>YUA CCA=>CUA CCA=>CUA UCG=>UUG | T=>I L=>L P=>L P=>L S=>L |
| Cyrtomium devexiscapulae | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77399-77803 78594-78602 78601 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Cyrtomium falcatum | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77542-77946 78742-78750 78749 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Cystopteris chinensis | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77667-78071 78834-78842 78841 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Deparia lancea | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77290-77694 78457-78465 78464 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Deparia pycnosora | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77593-77997 78756-78764 78763 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Deparia viridifrons | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77579-77983 78747-78755 78754 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Diplaziopsis javanica | Chloroplast | 3 | C-to-U: 1 NA: 2 | 78265-78669 79420-79428 79427 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Diplazium bellum | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77523-77927 77525 78681-78689 | CDS NA CDS | - + - | NA C-to-U NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Diplazium dilatatum | Chloroplast | 4 | C-to-U: 2 NA: 2 | 77444-77848 77446 78608-78616 78615 | CDS NA CDS NA | - + - + | NA C-to-U NA C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| Diplazium dushanense | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77452-77856 77454 78614-78622 | CDS NA CDS | - + - | NA C-to-U NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Diplazium striatum | Chloroplast | 4 | C-to-U: 2 NA: 2 | 77019-77423 77021 78183-78191 78190 | CDS NA CDS NA | - + - + | NA C-to-U NA C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| Diplazium unilobum | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77456-77860 77458 78621-78629 | CDS NA CDS | - + - | NA C-to-U NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Ginkgo biloba | Mitochondrion | 10 | C-to-U: 10 | 41215 41224 41238 41242 41255 41317 41371 41430 41530 41533 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | - - - - - - - - - - | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | ACG=>AUG CCA=>CUA UCC=>UCU GCG=>GUG CGG=>UGG CCC=>CUC ACA=>AUA AUC=>AUU CCA=>CUA GCG=>GUG | T=>M P=>L S=>S A=>V R=>W P=>L T=>I I=>I P=>L A=>V |
| Guadua angustifolia | Chloroplast | 2 | NA: 2 | 79938-80343 81435-81442 | CDS CDS | - - | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Homalosorus pycnocarpos | Chloroplast | 3 | C-to-U: 1 NA: 2 | 78243-78647 79398-79406 79405 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Hypodematium crenatum | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77152-77556 78327-78335 78334 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Jenufa minuta | Chloroplast | 1 | NA: 1 | 183521-183955 | CDS | - | NA | NA=>NA | NA=>NA |
| Lepisorus clathratus | Chloroplast | 3 | C-to-U: 1 NA: 2 | 76156-76560 77319-77327 77326 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Liriodendron tulipifera | Chloroplast | 1 | NA: 1 | 85138-85539 | CDS | - | NA | NA=>NA | NA=>NA |
| Liriodendron tulipifera | Mitochondrion | 1 | NA: 1 | 511850-512284 | CDS | - | NA | NA=>NA | NA=>NA |
| Lotus japonicus | Mitochondrion | 3 | C-to-U: 3 | 52901 52907 53204 | CDS CDS CDS | - - - | C-to-U C-to-U C-to-U | UCG=>UUG CCA=>CUA ACU=>AUU | S=>L P=>L T=>I |
| Macrothelypteris torresiana | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77421-77825 78595-78603 78602 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Matteuccia struthiopteris | Chloroplast | 3 | C-to-U: 1 NA: 2 | 76964-77368 78135-78143 78142 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Millettia pinnata | Mitochondrion | 3 | C-to-U: 3 | 295008 295305 295311 | CDS CDS CDS | + + + | C-to-U C-to-U C-to-U | ACU=>AUU CCA=>CUA UCG=>UUG | T=>I P=>L S=>L |
| Nelumbo nucifera | Mitochondrion | 10 | C-to-U: 9 NA: 1 | 373063-373578 373091 373097 373163 373177 373266 373334 373394 373396 373437 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | - + + + + + + + + + | NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA UCG=>UUG CCA=>CUA CCA=>CUA UCC=>UCU CUC=>UUC ACA=>AUA ACU=>AUU GGC=>GGU CGC=>UGC | NA=>NA S=>L P=>L P=>L S=>S L=>F U=>I U=>I G=>G R=>C |
| Nothoceros aenigmaticus | Plastid | 3 | NA: 3 | 102268-102673 102268-103702 103694-103702 | Exon NA Exon | - - - | NA NA NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Onoclea sensibilis | Chloroplast | 3 | C-to-U: 1 NA: 2 | 76618-77022 77794-77802 77801 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Ophioglossum californicum | Mitochondrion | 11 | C-to-U: 10 U-to-C: 1 | 15096 15146 15151 15197 15221 15226 15230 15248 15377 15437 15452 | 3'UTR CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | NA NA NA NA NA NA NA NA NA NA NA | C-to-U C-to-U C-to-U U-to-C C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA UCU=>UUU ACC=>ACU GUC=>GCC ACG=>AUG UUC=>UUU UCA=>UUA GCG=>GUG ACA=>AUA CCU=>CUU UCU=>UUU | NA=>NA S=>F T=>T V=>A T=>M F=>F S=>L A=>V T=>I P=>L S=>F |
| Orthotrichum diaphanum | Mitochondrion | 1 | NA: 1 | 95196-95603 | CDS | + | NA | NA=>NA | NA=>NA |
| Orthotrichum macrocephalum | Mitochondrion | 1 | NA: 1 | 95077-95484 | CDS | + | NA | NA=>NA | NA=>NA |
| Orthotrichum speciosum | Mitochondrion | 1 | NA: 1 | 95307-95714 | CDS | + | NA | NA=>NA | NA=>NA |
| Oryza sativa Japonica Group | Mitochondrion | 11 | C-to-U: 11 | 174194 174239 174371 174373 174374 174433 174501 174590 174604 174670 174676 | NA NA NA NA NA NA NA NA NA NA NA | + + + + + + + + + + + | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| Phoenix dactylifera | Mitochondrion | 13 | C-to-U: 13 | 237756 237789 237820 237839 237925 237966 237968 238028 238096 238185 238199 238265 238271 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + + + | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CUC=>CUU CUC=>CUU CAG=>UAG UCU=>UUU CGC=>UGC GGC=>GGU ACC=>AUC ACA=>AUA CUC=>UUC UCC=>UCU CCA=>CUA CCA=>CUA UCG=>UUG | L=>L L=>L Q=>TERM S=>F R=>C G=>G T=>I T=>I L=>F S=>S P=>L P=>L S=>L |
| Pseudophegopteris aurita | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77074-77478 78234-78242 78241 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Psilotum nudum | Mitochondrion | 9 | C-to-U: 9 | 194956 194973 195029 195119 195133 195143 195236 195315 195688 | CDS CDS CDS CDS CDS CDS CDS CDS 3'UTR | NA NA NA NA NA NA NA NA NA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CGG=>UGG GUC=>GUU CCU=>CUU GCA=>GUA CUC=>UUC CCU=>CUU UCA=>UUA ACC=>ACU NA=>NA | R=>W V=>V P=>L A=>V L=>F P=>L S=>L T=>T NA=>NA |
| Pteridium aquilinum subsp. aquilinum | Chloroplast | 3 | C-to-U: 1 NA: 2 | 79399-79803 80562-80570 80569 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Rhachidosorus consimilis | Chloroplast | 3 | C-to-U: 1 NA: 2 | 78318-78722 79485-79493 79492 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Rhizanthella gardneri | Plastid | 1 | C-to-U: 1 | 24348 | NA | + | C-to-U | NA=>NA | NA=>NA |
| Salix purpurea | Mitochondrion | 1 | NA: 1 | 420055-420465 | CDS | - | NA | NA=>NA | NA=>NA |
| Salvia miltiorrhiza | Mitochondrion | 1 | NA: 1 | 168331-168807 | CDS | - | NA | NA=>NA | NA=>NA |
| Schizaea elegans | Chloroplast | 3 | C-to-U: 1 NA: 2 | 70496-70900 71783-71791 71790 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Sequoia sempervirens | Chloroplast | 1 | NA: 1 | 12993-13415 | NA | - | NA | NA=>NA | NA=>NA |
| Stegnogramma sagittifolia | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77221-77625 78388-78396 78395 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Syntrichia filaris | Mitochondrion | 1 | NA: 1 | 96508-96915 | CDS | + | NA | NA=>NA | NA=>NA |
| Tetraphis pellucida | Mitochondrion | 1 | NA: 1 | 27466-27873 | CDS | + | NA | NA=>NA | NA=>NA |
| Woodsia macrochlaena | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77458-77862 78624-78632 78631 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Woodwardia unigemmata | Chloroplast | 3 | C-to-U: 1 NA: 2 | 77449-77853 78609-78617 78616 | CDS CDS NA | - - + | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Species | Organelle | Editing Sites | Editing Types | Genomic Position | Region | Strand | Type | Codons | Amino Acid |
( NA = Data Not Available )
Last update: Sep 2026
(version 2.0)