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Visualization
BarBoxComutationDotForestHeatmapHistogramLollipopMafsummaryMaftitvManhattanOncoprintPM-AdiversityPM-comp-corPM-comp-funcPM-comp-taxaPM-DistributionPM-HclusterPM-HeatmapPM-Marker-CorrPM-Marker-RFscorePM-Marker-TestPM-NetworkPM-PcaPM-PcoaPM-plot-taxaQ-QSurvivalUpsetVenn
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PM-plot-taxa
File Type
PM-plot-taxa
PM-plot-taxa

Data

Input(OTU.Count)
Example file

Parameters

G
GreenGenes-13-8 (16S rRNA, 97%)
SILVA
Oral_Core
GreenGenes-13-8 99%
GreenGenes-2
Refseq
SILVA 18S
ITS
T
TRUE
FALSE
References
 
Instructions

Visualizing microbial community composition from sequencing data using Krona.

PM-plot-taxa is a command for visualizing microbial taxonomic profiles from sequencing or OTU data using Krona, supporting single or multiple input files and optional rRNA copy number correction. It provides interactive, hierarchical visualizations that allow easy exploration of microbial community composition.

Contributor(s)
Yuzhu Chen, Jian Li, Yufeng Zhang, Mingqian Zhang, Zheng Sun, Gongchao Jing, Shi Huang, Xiaoquan Su
suxq@qdu.edu.cn
#Runs
7
Open Result