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TaxaCal
File Type
TaxaCal
TaxaCal

Data

Train 16s g data
Example file
train 16s g data
Example file
train wgs sp data
Example file
test data
Example file

Parameters

References
 
Instructions

Species-level taxonomy calibration and cross-platform correction for 16S microbiome data

TaxaCal (Taxonomic Calibrator), a machine learning algorithm designed to calibrate species-level taxonomy profiles in 16S amplicon data using a two-tier correction strategy. TaxaCal effectively reduces biases in amplicon sequencing, mitigating discrepancies between microbial profiles derived from 16S and WGS. Moreover, TaxaCal enables seamless cross-platform comparisons between these two sequencing approaches, significantly improving disease detection in 16S-based microbiome data.

Contributor(s)
Qingrong Shen, Xiaoqian Fan, Yangyang Sun, Hao Gao & Xiaoquan Su
suxq@qdu.edu.cn
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