Home
Category
Visualization
BarBoxComutationDotForestHeatmapHistogramLollipopMafsummaryMaftitvManhattanOncoprintPM-AdiversityPM-comp-corPM-comp-funcPM-comp-taxaPM-DistributionPM-HclusterPM-HeatmapPM-Marker-CorrPM-Marker-RFscorePM-Marker-TestPM-NetworkPM-PcaPM-PcoaPM-plot-taxaPM-rare-curvQ-QSurvivalUpsetVenn
Sequence alignment
BLASTDotmatcherDotpathDottupNeedlePM-BdiversityPM-extract-rnaPM-parallel-metaPM-pipelinePM-profilerPolydotWater
RNA Expression
Bulk RNA-seq Data AnalysisCancer Alternative Splicing AnalysisCCLHunterCIRI-deepCIRI3Cross-disease analysisDisease predictionEditing site annotationEditing site identificationEFDetectorFunGenGene-disease network constructionHELIXNCSelPredRNA-seq AnalysisSingle-cell RNA-seq Data AnalysisSPIRALTIVar diffTIVar predictVisualization of scRNA-seq Data Analysis Results
Variome analysis
BarcodeBLASTBarcodeFindereasyGWASExpPatternGeneFinderHaplotype analysisHapMapHapSnapLeadSNPFinderRice Varieties IdentificationRice Yield EstimationSeqFetchVersionMapWheat Head Estimation
Epigenome analysis
Age PredictorBS-RNAComparative analysis in nucleosomesDMR AnnotationDMR ToolkitEnrichment & AnnotationEnrichment analysis in nucleosome occupancyEWAS Network VisualizationGMQNIDMPLollipop PlotterMRAS
Long non-coding RNA
ClassificationFunctional PredictionID conversionLGClncbook-BLASTLncBot
Virus
COVID-19 genome variation annotationCOVID-19 haplotype analysisDenovo AssemblyEvolutionary treeFastq-to-VariantsGenealogy and Evolutionary AnalysisGenome AnnotationGenome TracingMcANMonkeypox virus genome variation annotationMonkeypox virus genome variation identificationPangolin COVID-19 Lineage AssignerSeqQCVENASVISTA
Single-cell omics
Cell Type ComparatorCell Type PredictorFGOTGOTRegChatSCSESSpaDCSpaMITACOS
Image Processing
Image CroppingImage DenoisingImage FlippingImage PartitioningImage Resizing
Others
Composition analysisCross-model analysisCross-species analysisCross-stages analysisHomolog FinderLUTLSRSMEFEMIAMicrobiome Search EngineMT-trackerncRNA-eQTLPM-parse-mipPM-predict-funcPM-predict-func-contributePM-predict-func-nstiPM-rand-rarePM-select-funcPM-select-taxaPM-split-seqTaxaCal
User Manual
Single-cell omics
Cell Type ComparatorCell Type PredictorFGOTGOTRegChatSCSESSpaDCSpaMITACOS
Home Single-cell omics
RegChat
File Type
RegChat
RegChat

Data

singnaling pathway associated TF,Receptor,Target
Example file
cell gene expression file
Example file
cell spatial coordinate file
Example file
cell label file
Example file

Parameters

False
True
False
False
True
False
References
 
Instructions

Gene regulatory & cell communication

 

Contributor(s)
Caiwei Zhen
cwzhen@whu.edu.cn
#Runs
0
Open Result