Tool Configuration
This program produces a manhattan plot given a snp file and other settings.

Data

All SNPs
Chromosome names
Highlighted SNPs

Parameters

References 
Turner, (2018). qqman: an R package for visualizing GWAS results using Q-Q and manhattan plots. Journal of Open Source Software, 3(25), 731, https://doi.org/10.21105/joss.00731.
Instructions 

This program produces a manhattan plot given a snp file and other settings.

A Manhattan plot is used to display data with a large number of data-points, many of non-zero amplitude, and with a distribution of higher-magnitude values. The plot is commonly used in genome-wide association studies (GWAS) to display significant SNPs.

Contributor(s)
Xinchang Zheng
zhengxinchang@big.ac.cn
Result Preview
Example output and submitted task results are displayed here.
#Runs 968